Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 FAM207CP-201ENST00000443486 507 ntBASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 AC109635.5-201ENST00000533593 962 ntBASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 AC008677.1-201ENST00000519230 1561 ntBASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 FO538757.1-201ENST00000623083 1397 ntBASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 AC005034.1-201ENST00000426657 489 ntBASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 AC125807.1-201ENST00000483097 614 ntBASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTFDC1Q9BY42 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 AC005225.4-201ENST00000557330 545 ntBASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 AC012645.4-201ENST00000610691 1061 ntBASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTFDC1Q9BY42 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTFDC1Q9BY42 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.83■□□□□ 0.92
RTFDC1Q9BY42 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.83■□□□□ 0.92
RTFDC1Q9BY42 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RTFDC1Q9BY42 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTFDC1Q9BY42 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTFDC1Q9BY42 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTFDC1Q9BY42 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 AL158211.3-201ENST00000607385 239 ntBASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTFDC1Q9BY42 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms