Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 AC099398.1-201ENST00000567919 2776 ntBASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 REXO1L11P-201ENST00000620964 1927 ntBASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SSBP3Q9BWW4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SSBP3Q9BWW4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
SSBP3Q9BWW4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SSBP3Q9BWW4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.46□□□□□ -0.1
SSBP3Q9BWW4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 RPL13AP23-201ENST00000480739 586 ntBASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 AC012640.2-201ENST00000561606 901 ntBASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 AF228730.7-201ENST00000641842 219 ntBASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 ZNF259P1-201ENST00000407656 1365 ntBASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP3Q9BWW4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 AC012317.2-201ENST00000623305 2251 ntBASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 AC098831.1-202ENST00000438821 336 ntBASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 SLC25A1P1-201ENST00000528351 927 ntBASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 AL356488.2-201ENST00000602755 427 ntBASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms