Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.32■□□□□ 0.2
YIPF4Q9BSR8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.32■□□□□ 0.2
YIPF4Q9BSR8 AL049757.1-201ENST00000616842 1596 ntBASIC16.32■□□□□ 0.2
YIPF4Q9BSR8 AD000864.1-201ENST00000624076 2295 ntBASIC16.32■□□□□ 0.2
YIPF4Q9BSR8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
YIPF4Q9BSR8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
YIPF4Q9BSR8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF4Q9BSR8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF4Q9BSR8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF4Q9BSR8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 NSUN5P1-202ENST00000421140 1535 ntBASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 NSUN5P2-203ENST00000457352 1529 ntBASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 TP73-AS1-210ENST00000637775 1455 ntBASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 AC016396.2-201ENST00000562575 1417 ntBASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 KRT17P6-201ENST00000453795 1220 ntBASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 AC096582.2-201ENST00000510860 516 ntBASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 AC074051.2-201ENST00000565115 352 ntBASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 MIR3180-1-201ENST00000580374 94 ntBASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 MIR3180-3-201ENST00000584616 94 ntBASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF4Q9BSR8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 AC103564.2-201ENST00000432853 1299 ntBASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 AC111152.3-201ENST00000569699 673 ntBASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
YIPF4Q9BSR8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 AC046185.3-201ENST00000623228 1824 ntBASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms