Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 OR7E14P-202ENST00000530490 1290 ntBASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CCM2Q9BSQ5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCM2Q9BSQ5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCM2Q9BSQ5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCM2Q9BSQ5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 AC106820.2-201ENST00000563775 3264 ntBASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 FDX1P1-201ENST00000449115 551 ntBASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 AC009078.2-202ENST00000463353 338 ntBASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 SLC25A6P4-201ENST00000586535 553 ntBASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 AC107918.4-202ENST00000641623 219 ntBASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CCM2Q9BSQ5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 MRPL3P1-201ENST00000400109 1033 ntBASIC17■□□□□ 0.31
CCM2Q9BSQ5 LAGE3P1-201ENST00000425356 484 ntBASIC17■□□□□ 0.31
CCM2Q9BSQ5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 AC093909.1-201ENST00000504731 1122 ntBASIC17■□□□□ 0.31
CCM2Q9BSQ5 PENK-208ENST00000523051 772 ntTSL 5 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17■□□□□ 0.31
CCM2Q9BSQ5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 AC148477.8-201ENST00000624298 468 ntBASIC17■□□□□ 0.31
CCM2Q9BSQ5 AC093525.9-201ENST00000624961 1746 ntBASIC17■□□□□ 0.31
CCM2Q9BSQ5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2Q9BSQ5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CCM2Q9BSQ5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.99■□□□□ 0.31
CCM2Q9BSQ5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2Q9BSQ5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.99■□□□□ 0.31
CCM2Q9BSQ5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
CCM2Q9BSQ5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms