Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDCA3Q99618 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDCA3Q99618 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDCA3Q99618 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.82■□□□□ 0.44
CDCA3Q99618 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDCA3Q99618 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CDCA3Q99618 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDCA3Q99618 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.82■□□□□ 0.44
CDCA3Q99618 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDCA3Q99618 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.82■□□□□ 0.44
CDCA3Q99618 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.82■□□□□ 0.44
CDCA3Q99618 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDCA3Q99618 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDCA3Q99618 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.82■□□□□ 0.44
CDCA3Q99618 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.82■□□□□ 0.44
CDCA3Q99618 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDCA3Q99618 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDCA3Q99618 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDCA3Q99618 RNU1-129P-201ENST00000384064 167 ntBASIC17.82■□□□□ 0.44
CDCA3Q99618 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDCA3Q99618 SERBP1P5-201ENST00000510079 1181 ntBASIC17.82■□□□□ 0.44
CDCA3Q99618 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.82■□□□□ 0.44
CDCA3Q99618 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.82■□□□□ 0.44
CDCA3Q99618 AC091167.2-201ENST00000579581 588 ntBASIC17.82■□□□□ 0.44
CDCA3Q99618 U1.21-201ENST00000580816 167 ntBASIC17.82■□□□□ 0.44
CDCA3Q99618 SPDYE22P-201ENST00000582158 798 ntBASIC17.82■□□□□ 0.44
CDCA3Q99618 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.82■□□□□ 0.44
CDCA3Q99618 AC073592.8-201ENST00000624126 511 ntBASIC17.82■□□□□ 0.44
CDCA3Q99618 AC025048.6-201ENST00000634326 1161 ntBASIC17.82■□□□□ 0.44
CDCA3Q99618 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.82■□□□□ 0.44
CDCA3Q99618 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDCA3Q99618 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDCA3Q99618 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDCA3Q99618 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.82■□□□□ 0.44
CDCA3Q99618 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.81■□□□□ 0.44
CDCA3Q99618 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDCA3Q99618 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDCA3Q99618 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDCA3Q99618 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.81■□□□□ 0.44
CDCA3Q99618 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDCA3Q99618 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDCA3Q99618 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDCA3Q99618 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.81■□□□□ 0.44
CDCA3Q99618 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.81■□□□□ 0.44
CDCA3Q99618 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.81■□□□□ 0.44
CDCA3Q99618 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.81■□□□□ 0.44
CDCA3Q99618 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CDCA3Q99618 MIR4453-201ENST00000584019 89 ntBASIC17.81■□□□□ 0.44
CDCA3Q99618 AL662799.1-202ENST00000614205 422 ntBASIC17.81■□□□□ 0.44
CDCA3Q99618 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDCA3Q99618 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDCA3Q99618 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDCA3Q99618 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA3Q99618 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 GNAS-203ENST00000306120 1878 ntBASIC17.8■□□□□ 0.44
CDCA3Q99618 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CDCA3Q99618 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.8■□□□□ 0.44
CDCA3Q99618 OR8S1-201ENST00000310194 1080 ntBASIC17.8■□□□□ 0.44
CDCA3Q99618 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA3Q99618 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA3Q99618 NME2P1-201ENST00000426182 414 ntBASIC17.8■□□□□ 0.44
CDCA3Q99618 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA3Q99618 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.8■□□□□ 0.44
CDCA3Q99618 AL359881.2-201ENST00000602973 570 ntBASIC17.8■□□□□ 0.44
CDCA3Q99618 AP001350.2-201ENST00000625104 1094 ntBASIC17.8■□□□□ 0.44
CDCA3Q99618 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA3Q99618 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.8■□□□□ 0.44
CDCA3Q99618 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.8■□□□□ 0.44
CDCA3Q99618 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.8■□□□□ 0.44
CDCA3Q99618 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CDCA3Q99618 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CDCA3Q99618 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA3Q99618 BCL2-203ENST00000589955 5011 ntBASIC17.8■□□□□ 0.44
CDCA3Q99618 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CDCA3Q99618 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.8■□□□□ 0.44
CDCA3Q99618 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.79■□□□□ 0.44
CDCA3Q99618 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms