Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.43■□□□□ 0.06
SPENQ96T58 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
SPENQ96T58 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.43■□□□□ 0.06
SPENQ96T58 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.43■□□□□ 0.06
SPENQ96T58 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 AL138828.2-201ENST00000615812 383 ntBASIC15.43■□□□□ 0.06
SPENQ96T58 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SPENQ96T58 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.43■□□□□ 0.06
SPENQ96T58 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SPENQ96T58 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.43■□□□□ 0.06
SPENQ96T58 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.43■□□□□ 0.06
SPENQ96T58 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPENQ96T58 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SPENQ96T58 NEFHP1-201ENST00000412845 2629 ntBASIC15.43■□□□□ 0.06
SPENQ96T58 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.43■□□□□ 0.06
SPENQ96T58 BX276092.7-203ENST00000637198 1536 ntBASIC15.43■□□□□ 0.06
SPENQ96T58 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.42■□□□□ 0.06
SPENQ96T58 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SPENQ96T58 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.42■□□□□ 0.06
SPENQ96T58 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SPENQ96T58 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.42■□□□□ 0.06
SPENQ96T58 AL592309.1-201ENST00000443127 649 ntBASIC15.42■□□□□ 0.06
SPENQ96T58 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SPENQ96T58 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.42■□□□□ 0.06
SPENQ96T58 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.42■□□□□ 0.06
SPENQ96T58 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SPENQ96T58 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.42■□□□□ 0.06
SPENQ96T58 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.42■□□□□ 0.06
SPENQ96T58 AC022144.1-201ENST00000602255 1580 ntBASIC15.42■□□□□ 0.06
SPENQ96T58 PIN1P1-201ENST00000412108 996 ntBASIC15.42■□□□□ 0.06
SPENQ96T58 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.42■□□□□ 0.06
SPENQ96T58 RARRES2P8-201ENST00000566335 367 ntBASIC15.42■□□□□ 0.06
SPENQ96T58 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.42■□□□□ 0.06
SPENQ96T58 AC007064.4-201ENST00000637740 555 ntBASIC15.42■□□□□ 0.06
SPENQ96T58 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPENQ96T58 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.42■□□□□ 0.06
SPENQ96T58 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.41■□□□□ 0.06
SPENQ96T58 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 ACTG1P4-201ENST00000425123 1122 ntBASIC15.41■□□□□ 0.06
SPENQ96T58 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.41■□□□□ 0.06
SPENQ96T58 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.41■□□□□ 0.06
SPENQ96T58 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.41■□□□□ 0.06
SPENQ96T58 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
SPENQ96T58 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.41■□□□□ 0.06
SPENQ96T58 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 AC100757.3-201ENST00000622361 1406 ntBASIC15.41■□□□□ 0.06
SPENQ96T58 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SPENQ96T58 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.41■□□□□ 0.06
SPENQ96T58 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 SPDYE7P-202ENST00000420373 878 ntBASIC15.41■□□□□ 0.06
SPENQ96T58 AC087163.2-201ENST00000457299 853 ntBASIC15.41■□□□□ 0.06
SPENQ96T58 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.41■□□□□ 0.06
SPENQ96T58 AP000842.3-202ENST00000569238 1080 ntBASIC15.41■□□□□ 0.06
SPENQ96T58 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.41■□□□□ 0.06
SPENQ96T58 IGHV3-72-202ENST00000621503 303 ntBASIC15.41■□□□□ 0.06
SPENQ96T58 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SPENQ96T58 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.41■□□□□ 0.06
SPENQ96T58 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SPENQ96T58 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPENQ96T58 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms