Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 FAM185BP-201ENST00000443595 716 ntBASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 AC105339.1-204ENST00000636249 355 ntBASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 SPCS2P1-201ENST00000561636 679 ntBASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 AC093028.1-201ENST00000622998 982 ntBASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 AKAP8P1-201ENST00000434743 1349 ntBASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 LINC00896-202ENST00000609602 2128 ntBASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDK5RAP2Q96SN8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 WASH6P-202ENST00000359512 1437 ntBASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 GPS2P2-201ENST00000430745 888 ntBASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 CYMP-203ENST00000474680 1263 ntBASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 AP001059.3-201ENST00000619053 235 ntBASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP2Q96SN8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.1■□□□□ 0.81
CDK5RAP2Q96SN8 FOXO1B-201ENST00000504678 1527 ntBASIC20.1■□□□□ 0.81
CDK5RAP2Q96SN8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP2Q96SN8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms