Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEMA4DQ92854 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEMA4DQ92854 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SEMA4DQ92854 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEMA4DQ92854 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEMA4DQ92854 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.58■□□□□ 0.56
SEMA4DQ92854 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEMA4DQ92854 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.58■□□□□ 0.56
SEMA4DQ92854 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEMA4DQ92854 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SEMA4DQ92854 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA4DQ92854 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 AL590787.1-201ENST00000568856 1315 ntBASIC18.56■□□□□ 0.56
SEMA4DQ92854 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA4DQ92854 AC092068.3-201ENST00000587894 2016 ntBASIC18.56■□□□□ 0.56
SEMA4DQ92854 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA4DQ92854 FRMD8P1-201ENST00000440433 1524 ntBASIC18.56■□□□□ 0.56
SEMA4DQ92854 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA4DQ92854 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA4DQ92854 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 AL121912.1-201ENST00000603683 238 ntBASIC18.56■□□□□ 0.56
SEMA4DQ92854 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 AC090340.1-201ENST00000620778 4980 ntBASIC18.56■□□□□ 0.56
SEMA4DQ92854 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA4DQ92854 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA4DQ92854 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA4DQ92854 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SEMA4DQ92854 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 SCARNA2-201ENST00000458748 420 ntBASIC18.55■□□□□ 0.56
SEMA4DQ92854 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.55■□□□□ 0.56
SEMA4DQ92854 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 AL031008.1-201ENST00000619963 541 ntBASIC18.55■□□□□ 0.56
SEMA4DQ92854 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SEMA4DQ92854 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA4DQ92854 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms