Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 FAM58DP-201ENST00000428076 619 ntBASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 DUX4L17-201ENST00000557360 1267 ntBASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 MIR4745-201ENST00000577608 62 ntBASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RAPGEF4Q8WZA2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.52■■□□□ 1.19
RAPGEF4Q8WZA2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 RNA5SP421-201ENST00000516864 134 ntBASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 AC005412.3-201ENST00000580309 715 ntBASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 AL161645.1-201ENST00000622716 1255 ntBASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC22.51■■□□□ 1.19
RAPGEF4Q8WZA2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 AC087289.5-201ENST00000586076 3175 ntBASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 AC093214.1-201ENST00000511688 1107 ntBASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 AL512356.2-201ENST00000546955 174 ntBASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPGEF4Q8WZA2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RAPGEF4Q8WZA2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 AC012569.1-201ENST00000591191 1524 ntBASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 SPCS2P4-201ENST00000436160 681 ntBASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
RAPGEF4Q8WZA2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms