Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.03■□□□□ 0.16
CT55Q8WUE5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CT55Q8WUE5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CT55Q8WUE5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CT55Q8WUE5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CT55Q8WUE5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CT55Q8WUE5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.03■□□□□ 0.16
CT55Q8WUE5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CT55Q8WUE5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CT55Q8WUE5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CT55Q8WUE5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CT55Q8WUE5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CT55Q8WUE5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CT55Q8WUE5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CT55Q8WUE5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CT55Q8WUE5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CT55Q8WUE5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CT55Q8WUE5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CT55Q8WUE5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CT55Q8WUE5 AC023141.5-201ENST00000458585 616 ntBASIC16.02■□□□□ 0.16
CT55Q8WUE5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.02■□□□□ 0.16
CT55Q8WUE5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.02■□□□□ 0.15
CT55Q8WUE5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CT55Q8WUE5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.02■□□□□ 0.15
CT55Q8WUE5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CT55Q8WUE5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CT55Q8WUE5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CT55Q8WUE5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CT55Q8WUE5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CT55Q8WUE5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CT55Q8WUE5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CT55Q8WUE5 AL354751.1-201ENST00000412768 1863 ntBASIC16.01■□□□□ 0.15
CT55Q8WUE5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 MIR770-201ENST00000390219 98 ntBASIC16.01■□□□□ 0.15
CT55Q8WUE5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 AL355306.1-201ENST00000415580 579 ntBASIC16.01■□□□□ 0.15
CT55Q8WUE5 AC140658.5-201ENST00000438532 169 ntBASIC16.01■□□□□ 0.15
CT55Q8WUE5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 AC099522.2-201ENST00000607001 744 ntBASIC16.01■□□□□ 0.15
CT55Q8WUE5 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CT55Q8WUE5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CT55Q8WUE5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CT55Q8WUE5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16■□□□□ 0.15
CT55Q8WUE5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CT55Q8WUE5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CT55Q8WUE5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms