Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAF3IP1Q8TDR0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAF3IP1Q8TDR0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAF3IP1Q8TDR0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 AC116353.5-201ENST00000638148 1699 ntBASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 AD000864.1-201ENST00000624076 2295 ntBASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 KRT17P6-201ENST00000453795 1220 ntBASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 AC096582.2-201ENST00000510860 516 ntBASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 AC069148.1-201ENST00000608741 768 ntBASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 TP73-AS1-210ENST00000637775 1455 ntBASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP1Q8TDR0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 PCDHA12-202ENST00000613593 2588 ntBASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 AP002383.4-201ENST00000442518 975 ntBASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 KRT18P35-201ENST00000510488 1269 ntBASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 AC011467.2-201ENST00000598425 242 ntBASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 AL358472.4-201ENST00000633140 710 ntBASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP1Q8TDR0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 ARMC10P1-201ENST00000313754 855 ntBASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 STK19B-204ENST00000512515 211 ntBASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 AC074051.2-201ENST00000565115 352 ntBASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 STK25P1-201ENST00000585406 838 ntBASIC18.04■□□□□ 0.48
TRAF3IP1Q8TDR0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms