Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 AL139424.1-201ENST00000607572 797 ntBASIC18.47■□□□□ 0.55
LMO3Q8TAP4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LMO3Q8TAP4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 PCDHB17P-201ENST00000539533 2393 ntBASIC18.46■□□□□ 0.55
LMO3Q8TAP4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 AC004706.3-202ENST00000621574 984 ntBASIC18.46■□□□□ 0.55
LMO3Q8TAP4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.46■□□□□ 0.55
LMO3Q8TAP4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.54
LMO3Q8TAP4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 AC084018.2-201ENST00000613093 2607 ntBASIC18.45■□□□□ 0.54
LMO3Q8TAP4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 EMBP1-201ENST00000458200 901 ntBASIC18.45■□□□□ 0.54
LMO3Q8TAP4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.45■□□□□ 0.54
LMO3Q8TAP4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms