Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 AC113404.2-201ENST00000507884 177 ntBASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 BX088651.1-201ENST00000540551 451 ntBASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD2Q8NHY2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.14■□□□□ 0.34
RFWD2Q8NHY2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.14■□□□□ 0.34
RFWD2Q8NHY2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RFWD2Q8NHY2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 C2orf69P3-201ENST00000565542 1120 ntBASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 AC092364.2-201ENST00000596710 2692 ntBASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 AL513523.2-202ENST00000427283 2040 ntBASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD2Q8NHY2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 KRT8P9-201ENST00000558927 1449 ntBASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 AC103702.1-201ENST00000548801 2630 ntBASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 MMP23A-201ENST00000234610 1017 ntBASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 AC007663.1-201ENST00000438948 1240 ntBASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 MIR3917-201ENST00000580971 93 ntBASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD2Q8NHY2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms