Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CFAP61Q8NHU2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CFAP61Q8NHU2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 CICP6-201ENST00000457191 2729 ntBASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CFAP61Q8NHU2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 GUSBP12-201ENST00000513727 720 ntBASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 AL121672.3-201ENST00000608644 468 ntBASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 AC091076.1-201ENST00000610741 619 ntBASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 AC009154.2-201ENST00000621177 724 ntBASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 AC100803.2-201ENST00000562459 1963 ntBASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP61Q8NHU2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 AC093458.2-201ENST00000623150 629 ntBASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP61Q8NHU2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 AC016734.2-201ENST00000624325 1377 ntBASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 DUTP2-201ENST00000519164 463 ntBASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms