Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 AC006557.2-201ENST00000592985 1240 ntBASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 AL049840.3-201ENST00000602669 611 ntBASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 AL139327.4-201ENST00000612362 153 ntBASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 BX640515.1-201ENST00000617215 977 ntBASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH20Q8N6Y1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 AL590627.1-203ENST00000421194 1026 ntBASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 NCF1C-201ENST00000438382 1427 ntBASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH20Q8N6Y1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 AC243591.1-201ENST00000452967 1364 ntBASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms