Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM48Q8IWZ4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM48Q8IWZ4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM48Q8IWZ4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRIM48Q8IWZ4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TRIM48Q8IWZ4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 AC148477.5-201ENST00000625164 1645 ntBASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 AP000347.1-202ENST00000435868 847 ntBASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM48Q8IWZ4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17■□□□□ 0.31
TRIM48Q8IWZ4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 AC005104.2-201ENST00000427818 678 ntBASIC17■□□□□ 0.31
TRIM48Q8IWZ4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 NCF1C-201ENST00000438382 1427 ntBASIC17■□□□□ 0.31
TRIM48Q8IWZ4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 AC009336.1-201ENST00000608941 1553 ntBASIC17■□□□□ 0.31
TRIM48Q8IWZ4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 AL589182.2-201ENST00000619332 1049 ntBASIC17■□□□□ 0.31
TRIM48Q8IWZ4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM48Q8IWZ4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 AF228730.7-201ENST00000641842 219 ntBASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms