Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 AC073347.1-201ENST00000421633 2643 ntBASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 AC022532.1-201ENST00000624563 1728 ntBASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD2Q8IV50 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 AC026271.3-201ENST00000571884 352 ntBASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD2Q8IV50 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 AL024508.2-201ENST00000607749 1894 ntBASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 CR392000.1-201ENST00000624770 1228 ntBASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD2Q8IV50 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD2Q8IV50 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.21■□□□□ 0.02
LYSMD2Q8IV50 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD2Q8IV50 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD2Q8IV50 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD2Q8IV50 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.21■□□□□ 0.02
LYSMD2Q8IV50 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.21■□□□□ 0.02
LYSMD2Q8IV50 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.21■□□□□ 0.02
LYSMD2Q8IV50 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.21■□□□□ 0.02
LYSMD2Q8IV50 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
LYSMD2Q8IV50 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 CICP13-201ENST00000422015 2789 ntBASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms