Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 AL121956.5-201ENST00000625261 221 ntBASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 BX276092.7-203ENST00000637198 1536 ntBASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 LINC01311-201ENST00000565162 1445 ntBASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 KRT18P65-201ENST00000439811 1286 ntBASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 AC113404.2-201ENST00000507884 177 ntBASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 AC024243.1-201ENST00000609234 778 ntBASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 AC091076.1-201ENST00000610741 619 ntBASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CRLF3Q8IUI8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 FAM86EP-206ENST00000510506 987 ntBASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRLF3Q8IUI8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRLF3Q8IUI8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms