Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AL023284.2-201ENST00000405850 579 ntBASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AL109923.1-201ENST00000618799 583 ntBASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AC126177.1-201ENST00000547829 2218 ntBASIC14.43□□□□□ -0.1
ZNF546Q86UE3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF546Q86UE3 AC067930.6-201ENST00000623257 4947 ntBASIC14.43□□□□□ -0.1
ZNF546Q86UE3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AC091390.4-202ENST00000476426 537 ntBASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AC008622.2-201ENST00000617006 1229 ntBASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AC092053.1-201ENST00000605787 1936 ntBASIC14.42□□□□□ -0.1
ZNF546Q86UE3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF546Q86UE3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF546Q86UE3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms