Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 LINC00896-202ENST00000609602 2128 ntBASIC11.89□□□□□ -0.51
CSMD3Q7Z407 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 POR-209ENST00000439269 1858 ntTSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 AL512384.1-201ENST00000406683 331 ntBASIC11.89□□□□□ -0.51
CSMD3Q7Z407 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 ALG1L8P-201ENST00000533887 760 ntBASIC11.89□□□□□ -0.51
CSMD3Q7Z407 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 API5-211ENST00000534695 560 ntTSL 5 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 WIZP1-201ENST00000531444 2299 ntBASIC11.88□□□□□ -0.51
CSMD3Q7Z407 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 AC138969.3-201ENST00000546612 1459 ntBASIC11.88□□□□□ -0.51
CSMD3Q7Z407 AC138932.2-201ENST00000548268 1459 ntBASIC11.88□□□□□ -0.51
CSMD3Q7Z407 AC126755.4-201ENST00000549796 1459 ntBASIC11.88□□□□□ -0.51
CSMD3Q7Z407 FOXO1B-201ENST00000504678 1527 ntBASIC11.88□□□□□ -0.51
CSMD3Q7Z407 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 TMEM14DP-201ENST00000422205 345 ntBASIC11.88□□□□□ -0.51
CSMD3Q7Z407 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 GIMAP3P-201ENST00000495150 836 ntBASIC11.88□□□□□ -0.51
CSMD3Q7Z407 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSMD3Q7Z407 AC098818.2-201ENST00000564925 2320 ntBASIC11.88□□□□□ -0.51
CSMD3Q7Z407 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 KRT17P8-201ENST00000540749 863 ntBASIC11.87□□□□□ -0.51
CSMD3Q7Z407 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 AC002558.1-201ENST00000488906 803 ntBASIC11.87□□□□□ -0.51
CSMD3Q7Z407 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms