Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP1BQ7LBR1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP1BQ7LBR1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP1BQ7LBR1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 AC005336.2-201ENST00000593183 939 ntBASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 BNIP3P18-201ENST00000593976 575 ntBASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 AL121894.2-201ENST00000602977 491 ntBASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 AC125634.1-201ENST00000438758 1403 ntBASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP1BQ7LBR1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 AC063926.3-201ENST00000624734 5658 ntBASIC16■□□□□ 0.15
CHMP1BQ7LBR1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16■□□□□ 0.15
CHMP1BQ7LBR1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 AL138831.2-201ENST00000606564 490 ntBASIC16■□□□□ 0.15
CHMP1BQ7LBR1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 AC080080.1-201ENST00000625121 2420 ntBASIC16■□□□□ 0.15
CHMP1BQ7LBR1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP1BQ7LBR1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms