Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 PCDHB17P-201ENST00000539533 2393 ntBASIC16.02■□□□□ 0.16
TUBA1AQ71U36 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 LINC02199-201ENST00000506655 2702 ntBASIC16.02■□□□□ 0.16
TUBA1AQ71U36 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 PVRIG2P-201ENST00000435460 978 ntBASIC16.02■□□□□ 0.16
TUBA1AQ71U36 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TUBA1AQ71U36 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBA1AQ71U36 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 AL662844.4-201ENST00000606367 2838 ntBASIC16.01■□□□□ 0.15
TUBA1AQ71U36 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.01■□□□□ 0.15
TUBA1AQ71U36 AL358472.4-201ENST00000633140 710 ntBASIC16.01■□□□□ 0.15
TUBA1AQ71U36 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 HLA-J-201ENST00000462773 1622 ntBASIC16.01■□□□□ 0.15
TUBA1AQ71U36 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA1AQ71U36 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
TUBA1AQ71U36 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16■□□□□ 0.15
TUBA1AQ71U36 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TUBA1AQ71U36 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TUBA1AQ71U36 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TUBA1AQ71U36 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16■□□□□ 0.15
TUBA1AQ71U36 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TUBA1AQ71U36 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16■□□□□ 0.15
TUBA1AQ71U36 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TUBA1AQ71U36 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
TUBA1AQ71U36 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16■□□□□ 0.15
TUBA1AQ71U36 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16■□□□□ 0.15
TUBA1AQ71U36 HLA-F-220ENST00000434407 884 ntBASIC16■□□□□ 0.15
TUBA1AQ71U36 FAM86EP-206ENST00000510506 987 ntBASIC16■□□□□ 0.15
TUBA1AQ71U36 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16■□□□□ 0.15
TUBA1AQ71U36 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms