Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 AC092580.3-201ENST00000430932 139 ntBASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 FAM207CP-201ENST00000443486 507 ntBASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 TAF8-206ENST00000472818 719 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 ALG1L8P-201ENST00000533887 760 ntBASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 RN7SL204P-201ENST00000582831 262 ntBASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC141Q6ZP82 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
CCDC141Q6ZP82 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 INGX-202ENST00000489074 768 ntBASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 AC190387.1-201ENST00000551683 408 ntBASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 AF228730.6-201ENST00000641497 218 ntBASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 AC084121.3-201ENST00000641716 218 ntBASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 AC105233.6-201ENST00000642093 218 ntBASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC141Q6ZP82 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 LINC00895-201ENST00000629028 1637 ntBASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC25.48■■□□□ 1.67
CCDC141Q6ZP82 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 AC142381.1-201ENST00000426099 345 ntBASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 TERF1P3-201ENST00000505638 1227 ntBASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 AC012645.4-201ENST00000610691 1061 ntBASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 AC069120.2-201ENST00000524091 540 ntBASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 RBM7-207ENST00000544582 692 ntTSL 3 BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC141Q6ZP82 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC141Q6ZP82 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC25.46■■□□□ 1.67
CCDC141Q6ZP82 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms