Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 AC008764.6-201ENST00000595909 2069 ntBASIC18.26■□□□□ 0.51
VARS2Q5ST30 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 AC244107.1-201ENST00000442033 332 ntBASIC18.26■□□□□ 0.51
VARS2Q5ST30 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 AC074386.1-202ENST00000463561 864 ntBASIC18.26■□□□□ 0.51
VARS2Q5ST30 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VARS2Q5ST30 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARS2Q5ST30 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 AL596442.2-201ENST00000610240 980 ntBASIC18.25■□□□□ 0.51
VARS2Q5ST30 ACTL9-202ENST00000612068 1252 ntBASIC18.25■□□□□ 0.51
VARS2Q5ST30 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.25■□□□□ 0.51
VARS2Q5ST30 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 ELL2P1-201ENST00000413990 1906 ntBASIC18.25■□□□□ 0.51
VARS2Q5ST30 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARS2Q5ST30 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 KRT18P28-201ENST00000453838 1332 ntBASIC18.24■□□□□ 0.51
VARS2Q5ST30 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 NOC2LP1-202ENST00000452600 2235 ntBASIC18.24■□□□□ 0.51
VARS2Q5ST30 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARS2Q5ST30 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.24■□□□□ 0.51
VARS2Q5ST30 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARS2Q5ST30 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARS2Q5ST30 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VARS2Q5ST30 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.23■□□□□ 0.51
VARS2Q5ST30 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms