Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ALFQ53S48 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ALFQ53S48 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
ALFQ53S48 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.78■□□□□ 0.44
ALFQ53S48 SLC25A1P3-201ENST00000395415 828 ntBASIC17.78■□□□□ 0.44
ALFQ53S48 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.78■□□□□ 0.44
ALFQ53S48 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.78■□□□□ 0.44
ALFQ53S48 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
ALFQ53S48 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.78■□□□□ 0.44
ALFQ53S48 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALFQ53S48 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.78■□□□□ 0.44
ALFQ53S48 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.78■□□□□ 0.44
ALFQ53S48 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ALFQ53S48 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.78■□□□□ 0.44
ALFQ53S48 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ALFQ53S48 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ALFQ53S48 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ALFQ53S48 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.77■□□□□ 0.44
ALFQ53S48 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ALFQ53S48 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ALFQ53S48 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.77■□□□□ 0.44
ALFQ53S48 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.77■□□□□ 0.44
ALFQ53S48 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.77■□□□□ 0.44
ALFQ53S48 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ALFQ53S48 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.77■□□□□ 0.44
ALFQ53S48 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.77■□□□□ 0.44
ALFQ53S48 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.77■□□□□ 0.44
ALFQ53S48 AC093909.1-201ENST00000504731 1122 ntBASIC17.77■□□□□ 0.44
ALFQ53S48 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.77■□□□□ 0.44
ALFQ53S48 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.77■□□□□ 0.44
ALFQ53S48 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.77■□□□□ 0.44
ALFQ53S48 AC016396.2-201ENST00000562575 1417 ntBASIC17.77■□□□□ 0.44
ALFQ53S48 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALFQ53S48 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALFQ53S48 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALFQ53S48 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ALFQ53S48 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALFQ53S48 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ALFQ53S48 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.76■□□□□ 0.43
ALFQ53S48 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.76■□□□□ 0.43
ALFQ53S48 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALFQ53S48 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ALFQ53S48 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ALFQ53S48 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALFQ53S48 IL9RP2-201ENST00000423948 1312 ntBASIC17.76■□□□□ 0.43
ALFQ53S48 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALFQ53S48 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALFQ53S48 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
ALFQ53S48 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ALFQ53S48 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALFQ53S48 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.76■□□□□ 0.43
ALFQ53S48 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.76■□□□□ 0.43
ALFQ53S48 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALFQ53S48 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.76■□□□□ 0.43
ALFQ53S48 AL590627.1-203ENST00000421194 1026 ntBASIC17.76■□□□□ 0.43
ALFQ53S48 AC098831.1-202ENST00000438821 336 ntBASIC17.76■□□□□ 0.43
ALFQ53S48 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.76■□□□□ 0.43
ALFQ53S48 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.76■□□□□ 0.43
ALFQ53S48 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALFQ53S48 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.76■□□□□ 0.43
ALFQ53S48 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.76■□□□□ 0.43
ALFQ53S48 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
ALFQ53S48 AL356488.2-201ENST00000602755 427 ntBASIC17.76■□□□□ 0.43
ALFQ53S48 AC117500.6-201ENST00000624871 588 ntBASIC17.76■□□□□ 0.43
ALFQ53S48 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ALFQ53S48 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALFQ53S48 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms