Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 PCDHA12-202ENST00000613593 2588 ntBASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 AP002414.1-201ENST00000391405 1147 ntBASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 PTCHD3P3-201ENST00000403073 906 ntBASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 AC023141.13-201ENST00000604991 943 ntBASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 GGTLC5P-201ENST00000617623 998 ntBASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 Z92544.3-201ENST00000624747 417 ntBASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 AC007064.4-201ENST00000637740 555 ntBASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CTC1Q2NKJ3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CTC1Q2NKJ3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.54
CTC1Q2NKJ3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CTC1Q2NKJ3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 AC015911.4-201ENST00000588022 1070 ntBASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 AC022145.2-201ENST00000598203 171 ntBASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTC1Q2NKJ3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 AC003669.1-201ENST00000334569 611 ntBASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 KLF4P1-201ENST00000412782 1185 ntBASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 AC023141.5-201ENST00000458585 616 ntBASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 AJ011932.1-201ENST00000621707 465 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms