Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP1Q04837 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.65□□□□□ -0.06
SSBP1Q04837 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP1Q04837 IGHV3-52-201ENST00000519770 353 ntBASIC14.65□□□□□ -0.06
SSBP1Q04837 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SSBP1Q04837 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.65□□□□□ -0.06
SSBP1Q04837 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.65□□□□□ -0.06
SSBP1Q04837 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 AP001412.1-201ENST00000608405 714 ntBASIC14.65□□□□□ -0.06
SSBP1Q04837 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP1Q04837 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP1Q04837 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SSBP1Q04837 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.65□□□□□ -0.06
SSBP1Q04837 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.65□□□□□ -0.06
SSBP1Q04837 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP1Q04837 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SSBP1Q04837 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.64□□□□□ -0.07
SSBP1Q04837 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
SSBP1Q04837 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.64□□□□□ -0.07
SSBP1Q04837 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 TSPY12P-201ENST00000421279 868 ntBASIC14.64□□□□□ -0.07
SSBP1Q04837 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.64□□□□□ -0.07
SSBP1Q04837 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SSBP1Q04837 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.64□□□□□ -0.07
SSBP1Q04837 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.64□□□□□ -0.07
SSBP1Q04837 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.64□□□□□ -0.07
SSBP1Q04837 AL512604.3-201ENST00000569583 964 ntBASIC14.64□□□□□ -0.07
SSBP1Q04837 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.64□□□□□ -0.07
SSBP1Q04837 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.64□□□□□ -0.07
SSBP1Q04837 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SSBP1Q04837 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.64□□□□□ -0.07
SSBP1Q04837 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SSBP1Q04837 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SSBP1Q04837 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SSBP1Q04837 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 TUBB8P12-201ENST00000308911 1335 ntBASIC14.64□□□□□ -0.07
SSBP1Q04837 TUBB7P-202ENST00000428444 1305 ntBASIC14.64□□□□□ -0.07
SSBP1Q04837 TUBB8P7-204ENST00000567960 1332 ntBASIC14.64□□□□□ -0.07
SSBP1Q04837 AC097374.2-201ENST00000618617 1306 ntBASIC14.64□□□□□ -0.07
SSBP1Q04837 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP1Q04837 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.63□□□□□ -0.07
SSBP1Q04837 AC104640.1-201ENST00000562617 2109 ntBASIC14.63□□□□□ -0.07
SSBP1Q04837 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.63□□□□□ -0.07
SSBP1Q04837 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SSBP1Q04837 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.63□□□□□ -0.07
SSBP1Q04837 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
SSBP1Q04837 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.63□□□□□ -0.07
SSBP1Q04837 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SSBP1Q04837 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.63□□□□□ -0.07
SSBP1Q04837 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP1Q04837 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SSBP1Q04837 COX5BP2-201ENST00000392354 334 ntBASIC14.63□□□□□ -0.07
SSBP1Q04837 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.63□□□□□ -0.07
SSBP1Q04837 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.63□□□□□ -0.07
SSBP1Q04837 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.63□□□□□ -0.07
SSBP1Q04837 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms