Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.88■□□□□ 0.29
YBX1P67809 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
YBX1P67809 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
YBX1P67809 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.88■□□□□ 0.29
YBX1P67809 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.87■□□□□ 0.29
YBX1P67809 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.87■□□□□ 0.29
YBX1P67809 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
YBX1P67809 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.87■□□□□ 0.29
YBX1P67809 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.87■□□□□ 0.29
YBX1P67809 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.87■□□□□ 0.29
YBX1P67809 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.87■□□□□ 0.29
YBX1P67809 FGFR3P6-201ENST00000457012 610 ntBASIC16.87■□□□□ 0.29
YBX1P67809 AC002558.1-201ENST00000488906 803 ntBASIC16.87■□□□□ 0.29
YBX1P67809 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
YBX1P67809 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.87■□□□□ 0.29
YBX1P67809 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.87■□□□□ 0.29
YBX1P67809 STK25P1-201ENST00000585406 838 ntBASIC16.87■□□□□ 0.29
YBX1P67809 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 AC008608.2-201ENST00000606089 416 ntBASIC16.87■□□□□ 0.29
YBX1P67809 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.87■□□□□ 0.29
YBX1P67809 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.87■□□□□ 0.29
YBX1P67809 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
YBX1P67809 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.87■□□□□ 0.29
YBX1P67809 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.87■□□□□ 0.29
YBX1P67809 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.87■□□□□ 0.29
YBX1P67809 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YBX1P67809 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.86■□□□□ 0.29
YBX1P67809 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.86■□□□□ 0.29
YBX1P67809 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.86■□□□□ 0.29
YBX1P67809 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.86■□□□□ 0.29
YBX1P67809 SAPCD2P3-201ENST00000455031 850 ntBASIC16.86■□□□□ 0.29
YBX1P67809 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.86■□□□□ 0.29
YBX1P67809 SART3-203ENST00000546611 1184 ntBASIC16.86■□□□□ 0.29
YBX1P67809 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.86■□□□□ 0.29
YBX1P67809 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 AL031008.1-201ENST00000619963 541 ntBASIC16.86■□□□□ 0.29
YBX1P67809 AL355877.3-201ENST00000622820 899 ntBASIC16.86■□□□□ 0.29
YBX1P67809 TP73-AS1-207ENST00000624167 988 ntBASIC16.86■□□□□ 0.29
YBX1P67809 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
YBX1P67809 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
YBX1P67809 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
YBX1P67809 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
YBX1P67809 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
YBX1P67809 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.86■□□□□ 0.29
YBX1P67809 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
YBX1P67809 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.86■□□□□ 0.29
YBX1P67809 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
YBX1P67809 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.85■□□□□ 0.29
YBX1P67809 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
YBX1P67809 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.85■□□□□ 0.29
YBX1P67809 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
YBX1P67809 BX005266.1-201ENST00000473402 457 ntBASIC16.85■□□□□ 0.29
YBX1P67809 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.85■□□□□ 0.29
YBX1P67809 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.85■□□□□ 0.29
YBX1P67809 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
YBX1P67809 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.85■□□□□ 0.29
YBX1P67809 NKAPP1-205ENST00000585790 367 ntBASIC16.85■□□□□ 0.29
YBX1P67809 AC104692.2-201ENST00000603054 253 ntBASIC16.85■□□□□ 0.29
YBX1P67809 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YBX1P67809 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.85■□□□□ 0.29
YBX1P67809 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.85■□□□□ 0.29
YBX1P67809 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms