Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.18■□□□□ 0.5
USP46P62068 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.18■□□□□ 0.5
USP46P62068 AC124067.4-201ENST00000519691 2379 ntBASIC18.18■□□□□ 0.5
USP46P62068 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.18■□□□□ 0.5
USP46P62068 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.18■□□□□ 0.5
USP46P62068 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
USP46P62068 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.18■□□□□ 0.5
USP46P62068 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP46P62068 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP46P62068 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.18■□□□□ 0.5
USP46P62068 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
USP46P62068 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.18■□□□□ 0.5
USP46P62068 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.18■□□□□ 0.5
USP46P62068 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.18■□□□□ 0.5
USP46P62068 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.18■□□□□ 0.5
USP46P62068 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.18■□□□□ 0.5
USP46P62068 AC008667.4-201ENST00000607370 168 ntBASIC18.18■□□□□ 0.5
USP46P62068 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.18■□□□□ 0.5
USP46P62068 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.18■□□□□ 0.5
USP46P62068 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.18■□□□□ 0.5
USP46P62068 AC133963.1-201ENST00000504166 1679 ntBASIC18.18■□□□□ 0.5
USP46P62068 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 AC134043.2-201ENST00000624206 2238 ntBASIC18.18■□□□□ 0.5
USP46P62068 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
USP46P62068 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP46P62068 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
USP46P62068 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
USP46P62068 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.17■□□□□ 0.5
USP46P62068 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
USP46P62068 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.17■□□□□ 0.5
USP46P62068 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
USP46P62068 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.17■□□□□ 0.5
USP46P62068 ACTG1P4-201ENST00000425123 1122 ntBASIC18.17■□□□□ 0.5
USP46P62068 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.17■□□□□ 0.5
USP46P62068 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.17■□□□□ 0.5
USP46P62068 AL591424.1-201ENST00000442569 1213 ntBASIC18.17■□□□□ 0.5
USP46P62068 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 KRT18P2-201ENST00000447938 1258 ntBASIC18.17■□□□□ 0.5
USP46P62068 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.17■□□□□ 0.5
USP46P62068 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.17■□□□□ 0.5
USP46P62068 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.17■□□□□ 0.5
USP46P62068 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.17■□□□□ 0.5
USP46P62068 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.17■□□□□ 0.5
USP46P62068 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 AC004790.2-201ENST00000623588 572 ntBASIC18.17■□□□□ 0.5
USP46P62068 AL805961.1-202ENST00000641562 540 ntBASIC18.17■□□□□ 0.5
USP46P62068 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.17■□□□□ 0.5
USP46P62068 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.17■□□□□ 0.5
USP46P62068 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
USP46P62068 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
USP46P62068 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
USP46P62068 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
USP46P62068 AL590787.1-201ENST00000568856 1315 ntBASIC18.17■□□□□ 0.5
USP46P62068 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
USP46P62068 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
USP46P62068 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
USP46P62068 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP46P62068 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
USP46P62068 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.16■□□□□ 0.5
USP46P62068 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.16■□□□□ 0.5
USP46P62068 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.16■□□□□ 0.5
USP46P62068 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.16■□□□□ 0.5
USP46P62068 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP46P62068 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms