Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TPRX2P-201ENST00000535362 881 ntBASIC19.28■□□□□ 0.68
LBX1P52954 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LBX1P52954 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.28■□□□□ 0.68
LBX1P52954 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.28■□□□□ 0.68
LBX1P52954 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.28■□□□□ 0.68
LBX1P52954 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.28■□□□□ 0.68
LBX1P52954 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.28■□□□□ 0.68
LBX1P52954 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.28■□□□□ 0.68
LBX1P52954 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 AC018665.1-201ENST00000622927 1362 ntBASIC19.28■□□□□ 0.68
LBX1P52954 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 LINC00565-201ENST00000562710 2331 ntBASIC19.28■□□□□ 0.68
LBX1P52954 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
LBX1P52954 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
LBX1P52954 AL161938.1-201ENST00000569833 2180 ntBASIC19.27■□□□□ 0.68
LBX1P52954 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LBX1P52954 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
LBX1P52954 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LBX1P52954 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
LBX1P52954 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LBX1P52954 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LBX1P52954 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LBX1P52954 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.27■□□□□ 0.68
LBX1P52954 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.27■□□□□ 0.68
LBX1P52954 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.27■□□□□ 0.68
LBX1P52954 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.27■□□□□ 0.68
LBX1P52954 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LBX1P52954 AC044860.1-202ENST00000559481 777 ntBASIC19.27■□□□□ 0.68
LBX1P52954 AL031055.1-201ENST00000606362 631 ntBASIC19.27■□□□□ 0.68
LBX1P52954 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LBX1P52954 AL033527.5-201ENST00000641382 801 ntBASIC19.27■□□□□ 0.68
LBX1P52954 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LBX1P52954 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LBX1P52954 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.27■□□□□ 0.68
LBX1P52954 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
LBX1P52954 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.67
LBX1P52954 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.27■□□□□ 0.67
LBX1P52954 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.67
LBX1P52954 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.27■□□□□ 0.67
LBX1P52954 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
LBX1P52954 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.26■□□□□ 0.67
LBX1P52954 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LBX1P52954 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.26■□□□□ 0.67
LBX1P52954 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LBX1P52954 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.26■□□□□ 0.67
LBX1P52954 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LBX1P52954 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LBX1P52954 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LBX1P52954 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.26■□□□□ 0.67
LBX1P52954 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LBX1P52954 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
LBX1P52954 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.26■□□□□ 0.67
LBX1P52954 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.26■□□□□ 0.67
LBX1P52954 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.26■□□□□ 0.67
LBX1P52954 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.26■□□□□ 0.67
LBX1P52954 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LBX1P52954 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.26■□□□□ 0.67
LBX1P52954 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.26■□□□□ 0.67
LBX1P52954 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.26■□□□□ 0.67
LBX1P52954 MIR4722-201ENST00000578292 60 ntBASIC19.26■□□□□ 0.67
LBX1P52954 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.26■□□□□ 0.67
LBX1P52954 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.26■□□□□ 0.67
LBX1P52954 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.26■□□□□ 0.67
LBX1P52954 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.26■□□□□ 0.67
LBX1P52954 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.26■□□□□ 0.67
LBX1P52954 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LBX1P52954 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LBX1P52954 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.26■□□□□ 0.67
LBX1P52954 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LBX1P52954 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.26■□□□□ 0.67
LBX1P52954 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LBX1P52954 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LBX1P52954 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LBX1P52954 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LBX1P52954 PHGDH-209ENST00000641074 1780 ntBASIC19.25■□□□□ 0.67
LBX1P52954 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.25■□□□□ 0.67
LBX1P52954 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LBX1P52954 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LBX1P52954 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LBX1P52954 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LBX1P52954 RNU1-129P-201ENST00000384064 167 ntBASIC19.25■□□□□ 0.67
LBX1P52954 BTBD6P1-201ENST00000412176 1267 ntBASIC19.25■□□□□ 0.67
LBX1P52954 AL080243.2-201ENST00000418783 582 ntBASIC19.25■□□□□ 0.67
LBX1P52954 KRT8P13-201ENST00000463294 1010 ntBASIC19.25■□□□□ 0.67
LBX1P52954 RN7SL618P-201ENST00000477850 296 ntBASIC19.25■□□□□ 0.67
LBX1P52954 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.25■□□□□ 0.67
LBX1P52954 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.25■□□□□ 0.67
LBX1P52954 C2orf69P2-201ENST00000562032 1123 ntBASIC19.25■□□□□ 0.67
LBX1P52954 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.25■□□□□ 0.67
LBX1P52954 U1.21-201ENST00000580816 167 ntBASIC19.25■□□□□ 0.67
LBX1P52954 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.25■□□□□ 0.67
LBX1P52954 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.25■□□□□ 0.67
LBX1P52954 AC015967.2-201ENST00000624092 234 ntBASIC19.25■□□□□ 0.67
LBX1P52954 AC006435.4-201ENST00000625037 234 ntBASIC19.25■□□□□ 0.67
LBX1P52954 AL356737.1-201ENST00000634391 234 ntBASIC19.25■□□□□ 0.67
LBX1P52954 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.25■□□□□ 0.67
LBX1P52954 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.25■□□□□ 0.67
LBX1P52954 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms