Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HMGA2P52926 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
HMGA2P52926 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HMGA2P52926 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.78■□□□□ 0.12
HMGA2P52926 HLA-A-202ENST00000376806 1854 ntBASIC15.78■□□□□ 0.12
HMGA2P52926 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGA2P52926 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HMGA2P52926 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HMGA2P52926 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
HMGA2P52926 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGA2P52926 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGA2P52926 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.78■□□□□ 0.12
HMGA2P52926 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
HMGA2P52926 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGA2P52926 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HMGA2P52926 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HMGA2P52926 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGA2P52926 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGA2P52926 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HMGA2P52926 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGA2P52926 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HMGA2P52926 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
HMGA2P52926 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGA2P52926 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGA2P52926 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 CICP6-201ENST00000457191 2729 ntBASIC15.77■□□□□ 0.12
HMGA2P52926 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.77■□□□□ 0.12
HMGA2P52926 AC022188.1-201ENST00000620960 1664 ntBASIC15.77■□□□□ 0.12
HMGA2P52926 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HMGA2P52926 TUBB8P12-201ENST00000308911 1335 ntBASIC15.77■□□□□ 0.12
HMGA2P52926 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 TUBB7P-202ENST00000428444 1305 ntBASIC15.77■□□□□ 0.12
HMGA2P52926 TUBB8P7-204ENST00000567960 1332 ntBASIC15.77■□□□□ 0.12
HMGA2P52926 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HMGA2P52926 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.77■□□□□ 0.12
HMGA2P52926 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.77■□□□□ 0.12
HMGA2P52926 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGA2P52926 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HMGA2P52926 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGA2P52926 RNF152P1-201ENST00000397754 604 ntBASIC15.77■□□□□ 0.12
HMGA2P52926 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.77■□□□□ 0.12
HMGA2P52926 AC112907.2-201ENST00000448639 330 ntBASIC15.77■□□□□ 0.12
HMGA2P52926 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.77■□□□□ 0.12
HMGA2P52926 AC005336.2-201ENST00000593183 939 ntBASIC15.77■□□□□ 0.12
HMGA2P52926 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.77■□□□□ 0.12
HMGA2P52926 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGA2P52926 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGA2P52926 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.77■□□□□ 0.11
HMGA2P52926 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HMGA2P52926 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HMGA2P52926 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGA2P52926 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
HMGA2P52926 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.77■□□□□ 0.11
HMGA2P52926 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.77■□□□□ 0.11
HMGA2P52926 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGA2P52926 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
HMGA2P52926 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGA2P52926 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 LINC02199-201ENST00000506655 2702 ntBASIC15.76■□□□□ 0.11
HMGA2P52926 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGA2P52926 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HMGA2P52926 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGA2P52926 AC113347.1-201ENST00000413321 391 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms