Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC30.51■■■□□ 2.47
SMARCA4P51532 PGF-202ENST00000405431 666 ntTSL 5 BASIC30.51■■■□□ 2.47
SMARCA4P51532 AC022494.1-201ENST00000466044 728 ntBASIC30.51■■■□□ 2.47
SMARCA4P51532 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SMARCA4P51532 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC30.5■■■□□ 2.47
SMARCA4P51532 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCA4P51532 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC30.5■■■□□ 2.47
SMARCA4P51532 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCA4P51532 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC30.5■■■□□ 2.47
SMARCA4P51532 EGFEM1P-202ENST00000431685 1563 ntBASIC30.5■■■□□ 2.47
SMARCA4P51532 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
SMARCA4P51532 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
SMARCA4P51532 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
SMARCA4P51532 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC30.5■■■□□ 2.47
SMARCA4P51532 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC30.5■■■□□ 2.47
SMARCA4P51532 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC30.5■■■□□ 2.47
SMARCA4P51532 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC30.5■■■□□ 2.47
SMARCA4P51532 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC30.5■■■□□ 2.47
SMARCA4P51532 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC30.5■■■□□ 2.47
SMARCA4P51532 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
SMARCA4P51532 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCA4P51532 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCA4P51532 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC30.49■■■□□ 2.47
SMARCA4P51532 AC138028.4-201ENST00000564984 1845 ntBASIC30.49■■■□□ 2.47
SMARCA4P51532 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA4P51532 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
SMARCA4P51532 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA4P51532 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC30.49■■■□□ 2.47
SMARCA4P51532 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC30.49■■■□□ 2.47
SMARCA4P51532 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
SMARCA4P51532 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA4P51532 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA4P51532 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA4P51532 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC30.49■■■□□ 2.47
SMARCA4P51532 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC30.49■■■□□ 2.47
SMARCA4P51532 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA4P51532 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA4P51532 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC30.49■■■□□ 2.47
SMARCA4P51532 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
SMARCA4P51532 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC30.49■■■□□ 2.47
SMARCA4P51532 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA4P51532 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
SMARCA4P51532 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA4P51532 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA4P51532 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
SMARCA4P51532 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA4P51532 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC30.48■■■□□ 2.47
SMARCA4P51532 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC30.48■■■□□ 2.47
SMARCA4P51532 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC30.48■■■□□ 2.47
SMARCA4P51532 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
SMARCA4P51532 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC30.48■■■□□ 2.47
SMARCA4P51532 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
SMARCA4P51532 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA4P51532 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA4P51532 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA4P51532 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA4P51532 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA4P51532 TP53TG3HP-202ENST00000569755 579 ntBASIC30.47■■■□□ 2.47
SMARCA4P51532 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC30.47■■■□□ 2.47
SMARCA4P51532 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA4P51532 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA4P51532 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA4P51532 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC30.47■■■□□ 2.47
SMARCA4P51532 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA4P51532 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA4P51532 TOP3BP1-201ENST00000420768 1380 ntBASIC30.47■■■□□ 2.47
SMARCA4P51532 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA4P51532 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
SMARCA4P51532 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC30.47■■■□□ 2.47
SMARCA4P51532 KRT17P7-201ENST00000451704 1104 ntBASIC30.47■■■□□ 2.47
SMARCA4P51532 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC30.47■■■□□ 2.47
SMARCA4P51532 AC009407.1-201ENST00000568958 598 ntBASIC30.47■■■□□ 2.47
SMARCA4P51532 IFT20-216ENST00000588477 774 ntTSL 5 BASIC30.47■■■□□ 2.47
SMARCA4P51532 WT1-AS_2.1-201ENST00000613208 137 ntBASIC30.47■■■□□ 2.47
SMARCA4P51532 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC30.47■■■□□ 2.47
SMARCA4P51532 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC30.47■■■□□ 2.47
SMARCA4P51532 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA4P51532 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC30.47■■■□□ 2.47
SMARCA4P51532 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC30.46■■■□□ 2.47
SMARCA4P51532 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCA4P51532 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCA4P51532 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCA4P51532 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
SMARCA4P51532 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC30.46■■■□□ 2.47
SMARCA4P51532 PODN-203ENST00000395871 2744 ntTSL 5 BASIC30.46■■■□□ 2.47
SMARCA4P51532 GPR53P-205ENST00000457298 1084 ntBASIC30.46■■■□□ 2.47
SMARCA4P51532 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCA4P51532 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC30.46■■■□□ 2.47
SMARCA4P51532 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC30.46■■■□□ 2.47
SMARCA4P51532 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC30.46■■■□□ 2.47
SMARCA4P51532 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC30.46■■■□□ 2.47
SMARCA4P51532 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC30.46■■■□□ 2.47
SMARCA4P51532 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCA4P51532 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC30.46■■■□□ 2.47
SMARCA4P51532 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
SMARCA4P51532 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
SMARCA4P51532 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC30.45■■■□□ 2.47
SMARCA4P51532 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SMARCA4P51532 STOM-203ENST00000538954 1257 ntTSL 5 BASIC30.45■■■□□ 2.47
SMARCA4P51532 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC30.45■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms