Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB28P51157 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB28P51157 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB28P51157 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAB28P51157 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAB28P51157 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RAB28P51157 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB28P51157 AP002414.3-201ENST00000589352 1468 ntBASIC16.69■□□□□ 0.26
RAB28P51157 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB28P51157 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB28P51157 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB28P51157 AC243591.1-201ENST00000452967 1364 ntBASIC16.69■□□□□ 0.26
RAB28P51157 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RAB28P51157 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB28P51157 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.69■□□□□ 0.26
RAB28P51157 AC092910.1-201ENST00000482027 1129 ntBASIC16.69■□□□□ 0.26
RAB28P51157 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB28P51157 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB28P51157 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB28P51157 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
RAB28P51157 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB28P51157 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.69■□□□□ 0.26
RAB28P51157 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB28P51157 AC116407.3-201ENST00000623905 1129 ntBASIC16.69■□□□□ 0.26
RAB28P51157 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB28P51157 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB28P51157 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB28P51157 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB28P51157 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RAB28P51157 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB28P51157 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RAB28P51157 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB28P51157 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RAB28P51157 AL590787.1-201ENST00000568856 1315 ntBASIC16.69■□□□□ 0.26
RAB28P51157 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RAB28P51157 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB28P51157 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB28P51157 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RAB28P51157 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB28P51157 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB28P51157 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB28P51157 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB28P51157 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB28P51157 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB28P51157 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RAB28P51157 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB28P51157 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB28P51157 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB28P51157 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB28P51157 AC005593.1-201ENST00000624894 515 ntBASIC16.68■□□□□ 0.26
RAB28P51157 AL805961.1-202ENST00000641562 540 ntBASIC16.68■□□□□ 0.26
RAB28P51157 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB28P51157 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB28P51157 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RAB28P51157 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB28P51157 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB28P51157 EGFEM1P-202ENST00000431685 1563 ntBASIC16.68■□□□□ 0.26
RAB28P51157 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB28P51157 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB28P51157 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB28P51157 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB28P51157 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB28P51157 SLC25A1P3-201ENST00000395415 828 ntBASIC16.67■□□□□ 0.26
RAB28P51157 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB28P51157 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB28P51157 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB28P51157 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB28P51157 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB28P51157 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB28P51157 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RAB28P51157 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB28P51157 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 AC139713.2-201ENST00000641328 2723 ntBASIC16.67■□□□□ 0.26
RAB28P51157 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB28P51157 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RAB28P51157 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms