Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
RFC5P40937 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RFC5P40937 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RFC5P40937 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 PGAM5P1-201ENST00000518923 814 ntBASIC19.04■□□□□ 0.64
RFC5P40937 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
RFC5P40937 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.04■□□□□ 0.64
RFC5P40937 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.04■□□□□ 0.64
RFC5P40937 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.04■□□□□ 0.64
RFC5P40937 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
RFC5P40937 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
RFC5P40937 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC5P40937 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RFC5P40937 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RFC5P40937 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC5P40937 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RFC5P40937 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC5P40937 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC5P40937 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC5P40937 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC5P40937 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC5P40937 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC5P40937 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RFC5P40937 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
RFC5P40937 HCG4B-203ENST00000450128 991 ntBASIC19.03■□□□□ 0.64
RFC5P40937 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.03■□□□□ 0.64
RFC5P40937 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC5P40937 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC5P40937 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC5P40937 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC5P40937 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC5P40937 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC5P40937 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC5P40937 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC5P40937 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC5P40937 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC5P40937 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC5P40937 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC5P40937 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC5P40937 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RFC5P40937 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC5P40937 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC5P40937 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC5P40937 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.02■□□□□ 0.64
RFC5P40937 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RFC5P40937 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.02■□□□□ 0.64
RFC5P40937 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.02■□□□□ 0.64
RFC5P40937 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.02■□□□□ 0.64
RFC5P40937 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.02■□□□□ 0.64
RFC5P40937 OR7E47P-204ENST00000575924 449 ntBASIC19.02■□□□□ 0.64
RFC5P40937 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.02■□□□□ 0.64
RFC5P40937 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RFC5P40937 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC5P40937 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RFC5P40937 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC5P40937 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC5P40937 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC5P40937 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC5P40937 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RFC5P40937 HTR7P1-202ENST00000624664 4411 ntBASIC19.02■□□□□ 0.63
RFC5P40937 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
RFC5P40937 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC5P40937 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RFC5P40937 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
RFC5P40937 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
RFC5P40937 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC5P40937 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RFC5P40937 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC5P40937 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC5P40937 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.01■□□□□ 0.63
RFC5P40937 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
RFC5P40937 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
RFC5P40937 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC5P40937 AC067852.2-201ENST00000590513 2313 ntBASIC19.01■□□□□ 0.63
RFC5P40937 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC5P40937 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RFC5P40937 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.01■□□□□ 0.63
RFC5P40937 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC5P40937 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
RFC5P40937 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RFC5P40937 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.01■□□□□ 0.63
RFC5P40937 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.01■□□□□ 0.63
RFC5P40937 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFC5P40937 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.01■□□□□ 0.63
RFC5P40937 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFC5P40937 AC040169.1-201ENST00000565382 521 ntBASIC19.01■□□□□ 0.63
RFC5P40937 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RFC5P40937 AC023511.2-201ENST00000618803 211 ntBASIC19.01■□□□□ 0.63
RFC5P40937 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC5P40937 EGFEM1P-202ENST00000431685 1563 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms