Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AL355877.3-201ENST00000622820 899 ntBASIC14.15□□□□□ -0.14
CEACAM3P40198 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 LYSMD4-203ENST00000378904 2122 ntBASIC14.15□□□□□ -0.14
CEACAM3P40198 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.15□□□□□ -0.14
CEACAM3P40198 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.15□□□□□ -0.14
CEACAM3P40198 SIGLEC16-201ENST00000599858 1437 ntBASIC14.15□□□□□ -0.14
CEACAM3P40198 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CEACAM3P40198 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.14□□□□□ -0.15
CEACAM3P40198 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.14□□□□□ -0.15
CEACAM3P40198 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CEACAM3P40198 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 AC132938.5-201ENST00000624980 1813 ntBASIC14.14□□□□□ -0.15
CEACAM3P40198 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.14□□□□□ -0.15
CEACAM3P40198 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.14□□□□□ -0.15
CEACAM3P40198 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.14□□□□□ -0.15
CEACAM3P40198 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CEACAM3P40198 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CEACAM3P40198 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.14□□□□□ -0.15
CEACAM3P40198 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.14□□□□□ -0.15
CEACAM3P40198 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.14□□□□□ -0.15
CEACAM3P40198 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.14□□□□□ -0.15
CEACAM3P40198 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 AC079776.2-201ENST00000641154 1609 ntBASIC14.14□□□□□ -0.15
CEACAM3P40198 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
CEACAM3P40198 AC067852.2-201ENST00000590513 2313 ntBASIC14.14□□□□□ -0.15
CEACAM3P40198 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CEACAM3P40198 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
CEACAM3P40198 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CEACAM3P40198 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.13□□□□□ -0.15
CEACAM3P40198 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.13□□□□□ -0.15
CEACAM3P40198 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CEACAM3P40198 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.13□□□□□ -0.15
CEACAM3P40198 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.13□□□□□ -0.15
CEACAM3P40198 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CEACAM3P40198 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CEACAM3P40198 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.13□□□□□ -0.15
CEACAM3P40198 TPM4P1-201ENST00000436100 807 ntBASIC14.13□□□□□ -0.15
CEACAM3P40198 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.13□□□□□ -0.15
CEACAM3P40198 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.13□□□□□ -0.15
CEACAM3P40198 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.13□□□□□ -0.15
CEACAM3P40198 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.13□□□□□ -0.15
CEACAM3P40198 LINC00896-202ENST00000609602 2128 ntBASIC14.13□□□□□ -0.15
CEACAM3P40198 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.13□□□□□ -0.15
CEACAM3P40198 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.13□□□□□ -0.15
CEACAM3P40198 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CEACAM3P40198 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.13□□□□□ -0.15
CEACAM3P40198 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.13□□□□□ -0.15
CEACAM3P40198 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.13□□□□□ -0.15
CEACAM3P40198 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
CEACAM3P40198 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CEACAM3P40198 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.13□□□□□ -0.15
CEACAM3P40198 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CEACAM3P40198 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CEACAM3P40198 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CEACAM3P40198 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CEACAM3P40198 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.12□□□□□ -0.15
CEACAM3P40198 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
CEACAM3P40198 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms