Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.45■□□□□ 0.22
RORAP35398 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.45■□□□□ 0.22
RORAP35398 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.45■□□□□ 0.22
RORAP35398 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.45■□□□□ 0.22
RORAP35398 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.45■□□□□ 0.22
RORAP35398 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.45■□□□□ 0.22
RORAP35398 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.45■□□□□ 0.22
RORAP35398 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.45■□□□□ 0.22
RORAP35398 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.45■□□□□ 0.22
RORAP35398 AL353135.1-201ENST00000606729 504 ntBASIC16.45■□□□□ 0.22
RORAP35398 LINC01451-201ENST00000623792 534 ntBASIC16.45■□□□□ 0.22
RORAP35398 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.45■□□□□ 0.22
RORAP35398 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.45■□□□□ 0.22
RORAP35398 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 GNAS-203ENST00000306120 1878 ntBASIC16.45■□□□□ 0.22
RORAP35398 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.45■□□□□ 0.22
RORAP35398 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.45■□□□□ 0.22
RORAP35398 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.45■□□□□ 0.22
RORAP35398 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RORAP35398 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.45■□□□□ 0.22
RORAP35398 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RORAP35398 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RORAP35398 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RORAP35398 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.44■□□□□ 0.22
RORAP35398 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
RORAP35398 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RORAP35398 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RORAP35398 GPR89P-201ENST00000407924 1495 ntBASIC16.44■□□□□ 0.22
RORAP35398 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.44■□□□□ 0.22
RORAP35398 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.44■□□□□ 0.22
RORAP35398 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RORAP35398 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RORAP35398 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RORAP35398 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.44■□□□□ 0.22
RORAP35398 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RORAP35398 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RORAP35398 AC108073.2-201ENST00000464002 357 ntBASIC16.44■□□□□ 0.22
RORAP35398 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.44■□□□□ 0.22
RORAP35398 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.44■□□□□ 0.22
RORAP35398 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.44■□□□□ 0.22
RORAP35398 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.44■□□□□ 0.22
RORAP35398 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.44■□□□□ 0.22
RORAP35398 AL805961.1-202ENST00000641562 540 ntBASIC16.44■□□□□ 0.22
RORAP35398 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RORAP35398 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.44■□□□□ 0.22
RORAP35398 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.44■□□□□ 0.22
RORAP35398 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RORAP35398 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.44■□□□□ 0.22
RORAP35398 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RORAP35398 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RORAP35398 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RORAP35398 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RORAP35398 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.43■□□□□ 0.22
RORAP35398 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.43■□□□□ 0.22
RORAP35398 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RORAP35398 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RORAP35398 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RORAP35398 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.43■□□□□ 0.22
RORAP35398 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RORAP35398 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.43■□□□□ 0.22
RORAP35398 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.43■□□□□ 0.22
RORAP35398 LINC00982-205ENST00000420957 435 ntBASIC16.43■□□□□ 0.22
RORAP35398 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.43■□□□□ 0.22
RORAP35398 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.43■□□□□ 0.22
RORAP35398 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.43■□□□□ 0.22
RORAP35398 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RORAP35398 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RORAP35398 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RORAP35398 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.43■□□□□ 0.22
RORAP35398 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RORAP35398 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RORAP35398 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RORAP35398 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms