Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.78□□□□□ -0.36
CKS2P33552 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CKS2P33552 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.78□□□□□ -0.36
CKS2P33552 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CKS2P33552 AC097376.2-205ENST00000610159 5334 ntBASIC12.78□□□□□ -0.36
CKS2P33552 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 AC022188.1-201ENST00000620960 1664 ntBASIC12.78□□□□□ -0.36
CKS2P33552 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CKS2P33552 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 NCF1B-203ENST00000435988 1254 ntBASIC12.78□□□□□ -0.36
CKS2P33552 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.78□□□□□ -0.36
CKS2P33552 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.78□□□□□ -0.36
CKS2P33552 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 LINC02012-201ENST00000608206 1725 ntBASIC12.78□□□□□ -0.36
CKS2P33552 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CKS2P33552 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CKS2P33552 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CKS2P33552 FSCN1P1-201ENST00000568912 1481 ntBASIC12.78□□□□□ -0.36
CKS2P33552 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.78□□□□□ -0.36
CKS2P33552 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.78□□□□□ -0.36
CKS2P33552 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CKS2P33552 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CKS2P33552 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CKS2P33552 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CKS2P33552 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CKS2P33552 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CKS2P33552 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CKS2P33552 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.77□□□□□ -0.36
CKS2P33552 AC007950.2-201ENST00000615045 2347 ntBASIC12.77□□□□□ -0.36
CKS2P33552 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
CKS2P33552 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
CKS2P33552 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CKS2P33552 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CKS2P33552 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
CKS2P33552 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
CKS2P33552 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
CKS2P33552 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CKS2P33552 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.77□□□□□ -0.37
CKS2P33552 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.77□□□□□ -0.37
CKS2P33552 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.77□□□□□ -0.37
CKS2P33552 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
CKS2P33552 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.77□□□□□ -0.37
CKS2P33552 AL137784.2-201ENST00000607332 1000 ntBASIC12.77□□□□□ -0.37
CKS2P33552 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
CKS2P33552 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CKS2P33552 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.77□□□□□ -0.37
CKS2P33552 AL662844.4-201ENST00000606367 2838 ntBASIC12.77□□□□□ -0.37
CKS2P33552 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.77□□□□□ -0.37
CKS2P33552 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.77□□□□□ -0.37
CKS2P33552 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.77□□□□□ -0.37
CKS2P33552 RNF216P1-203ENST00000404404 2427 ntBASIC12.77□□□□□ -0.37
CKS2P33552 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CKS2P33552 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.76□□□□□ -0.37
CKS2P33552 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 AC046185.3-201ENST00000623228 1824 ntBASIC12.76□□□□□ -0.37
CKS2P33552 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CKS2P33552 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms