Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
EPHA3P29320 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHA3P29320 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
EPHA3P29320 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHA3P29320 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHA3P29320 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHA3P29320 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHA3P29320 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHA3P29320 AC140113.3-201ENST00000605663 199 ntBASIC16.87■□□□□ 0.29
EPHA3P29320 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.87■□□□□ 0.29
EPHA3P29320 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 AP006294.2-201ENST00000641667 209 ntBASIC16.87■□□□□ 0.29
EPHA3P29320 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
EPHA3P29320 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
EPHA3P29320 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHA3P29320 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 KRT18P22-201ENST00000402024 1347 ntBASIC16.87■□□□□ 0.29
EPHA3P29320 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EPHA3P29320 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.87■□□□□ 0.29
EPHA3P29320 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
EPHA3P29320 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.86■□□□□ 0.29
EPHA3P29320 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EPHA3P29320 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.86■□□□□ 0.29
EPHA3P29320 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 COX5BP2-201ENST00000392354 334 ntBASIC16.86■□□□□ 0.29
EPHA3P29320 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA3P29320 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA3P29320 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.86■□□□□ 0.29
EPHA3P29320 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EPHA3P29320 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
EPHA3P29320 AP003733.1-201ENST00000491725 852 ntBASIC16.86■□□□□ 0.29
EPHA3P29320 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.86■□□□□ 0.29
EPHA3P29320 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA3P29320 AL441883.1-201ENST00000566170 1045 ntBASIC16.86■□□□□ 0.29
EPHA3P29320 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA3P29320 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.86■□□□□ 0.29
EPHA3P29320 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.86■□□□□ 0.29
EPHA3P29320 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA3P29320 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 AL596257.1-201ENST00000641463 2694 ntBASIC16.86■□□□□ 0.29
EPHA3P29320 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EPHA3P29320 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA3P29320 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA3P29320 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
EPHA3P29320 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHA3P29320 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHA3P29320 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.85■□□□□ 0.29
EPHA3P29320 AC092597.1-201ENST00000487352 616 ntBASIC16.85■□□□□ 0.29
EPHA3P29320 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
EPHA3P29320 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHA3P29320 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHA3P29320 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
EPHA3P29320 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHA3P29320 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
EPHA3P29320 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms