Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFSF4P23510 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFSF4P23510 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TNFSF4P23510 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TNFSF4P23510 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFSF4P23510 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TNFSF4P23510 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFSF4P23510 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFSF4P23510 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TNFSF4P23510 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.83□□□□□ -0.04
TNFSF4P23510 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 AC046185.3-201ENST00000623228 1824 ntBASIC14.82□□□□□ -0.04
TNFSF4P23510 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF4P23510 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFSF4P23510 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF4P23510 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFSF4P23510 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
TNFSF4P23510 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
TNFSF4P23510 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFSF4P23510 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TNFSF4P23510 FAM197Y8-203ENST00000450145 560 ntBASIC14.82□□□□□ -0.04
TNFSF4P23510 AC093909.1-201ENST00000504731 1122 ntBASIC14.82□□□□□ -0.04
TNFSF4P23510 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.82□□□□□ -0.04
TNFSF4P23510 AL160237.2-201ENST00000556165 472 ntBASIC14.82□□□□□ -0.04
TNFSF4P23510 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.82□□□□□ -0.04
TNFSF4P23510 NKAPP1-205ENST00000585790 367 ntBASIC14.82□□□□□ -0.04
TNFSF4P23510 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.82□□□□□ -0.04
TNFSF4P23510 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFSF4P23510 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFSF4P23510 AL031008.1-201ENST00000619963 541 ntBASIC14.82□□□□□ -0.04
TNFSF4P23510 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF4P23510 AC073592.4-201ENST00000623827 446 ntBASIC14.82□□□□□ -0.04
TNFSF4P23510 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFSF4P23510 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFSF4P23510 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF4P23510 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TNFSF4P23510 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFSF4P23510 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
TNFSF4P23510 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFSF4P23510 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF4P23510 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFSF4P23510 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF4P23510 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF4P23510 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF4P23510 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFSF4P23510 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TNFSF4P23510 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF4P23510 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF4P23510 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF4P23510 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF4P23510 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF4P23510 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF4P23510 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF4P23510 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.81□□□□□ -0.04
TNFSF4P23510 PRYP5-201ENST00000451909 266 ntBASIC14.81□□□□□ -0.04
TNFSF4P23510 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFSF4P23510 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF4P23510 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF4P23510 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF4P23510 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF4P23510 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms