Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SLC25A6P4-201ENST00000586535 553 ntBASIC17.01■□□□□ 0.31
CDH3P22223 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH3P22223 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17■□□□□ 0.31
CDH3P22223 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDH3P22223 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17■□□□□ 0.31
CDH3P22223 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH3P22223 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH3P22223 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH3P22223 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17■□□□□ 0.31
CDH3P22223 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 MRPL3P1-201ENST00000400109 1033 ntBASIC17■□□□□ 0.31
CDH3P22223 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17■□□□□ 0.31
CDH3P22223 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17■□□□□ 0.31
CDH3P22223 DDX43P3-201ENST00000441064 443 ntBASIC17■□□□□ 0.31
CDH3P22223 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17■□□□□ 0.31
CDH3P22223 AC079776.4-201ENST00000511039 504 ntBASIC17■□□□□ 0.31
CDH3P22223 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH3P22223 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17■□□□□ 0.31
CDH3P22223 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17■□□□□ 0.31
CDH3P22223 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
CDH3P22223 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17■□□□□ 0.31
CDH3P22223 BX276092.7-203ENST00000637198 1536 ntBASIC17■□□□□ 0.31
CDH3P22223 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH3P22223 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17■□□□□ 0.31
CDH3P22223 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH3P22223 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH3P22223 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CDH3P22223 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
CDH3P22223 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH3P22223 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 FER1L4-210ENST00000615531 5998 ntBASIC16.99■□□□□ 0.31
CDH3P22223 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDH3P22223 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH3P22223 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CDH3P22223 KRT18P67-201ENST00000432816 1264 ntBASIC16.99■□□□□ 0.31
CDH3P22223 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH3P22223 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH3P22223 AL773604.1-201ENST00000617417 272 ntBASIC16.99■□□□□ 0.31
CDH3P22223 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH3P22223 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH3P22223 KRT18P55-202ENST00000578578 1546 ntBASIC16.99■□□□□ 0.31
CDH3P22223 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH3P22223 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDH3P22223 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH3P22223 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH3P22223 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH3P22223 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH3P22223 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH3P22223 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH3P22223 AL118508.1-201ENST00000613502 2345 ntBASIC16.98■□□□□ 0.31
CDH3P22223 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms