Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.69■□□□□ 0.26
CAPN3P20807 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN3P20807 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.69■□□□□ 0.26
CAPN3P20807 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN3P20807 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN3P20807 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN3P20807 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN3P20807 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN3P20807 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN3P20807 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN3P20807 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.69■□□□□ 0.26
CAPN3P20807 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CAPN3P20807 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPN3P20807 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPN3P20807 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN3P20807 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPN3P20807 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN3P20807 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN3P20807 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CAPN3P20807 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPN3P20807 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN3P20807 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN3P20807 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPN3P20807 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.68■□□□□ 0.26
CAPN3P20807 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.68■□□□□ 0.26
CAPN3P20807 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.68■□□□□ 0.26
CAPN3P20807 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN3P20807 AC096633.1-201ENST00000422446 749 ntBASIC16.68■□□□□ 0.26
CAPN3P20807 SPDYE15P-201ENST00000424157 909 ntBASIC16.68■□□□□ 0.26
CAPN3P20807 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN3P20807 AC246785.2-201ENST00000432512 513 ntBASIC16.68■□□□□ 0.26
CAPN3P20807 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.68■□□□□ 0.26
CAPN3P20807 MTCL1P1-201ENST00000446207 792 ntBASIC16.68■□□□□ 0.26
CAPN3P20807 KRT17P6-201ENST00000453795 1220 ntBASIC16.68■□□□□ 0.26
CAPN3P20807 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.68■□□□□ 0.26
CAPN3P20807 RN7SL510P-201ENST00000581311 263 ntBASIC16.68■□□□□ 0.26
CAPN3P20807 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CAPN3P20807 AC006538.3-201ENST00000612495 578 ntBASIC16.68■□□□□ 0.26
CAPN3P20807 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPN3P20807 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
CAPN3P20807 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 AC046158.3-201ENST00000624947 2558 ntBASIC16.68■□□□□ 0.26
CAPN3P20807 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN3P20807 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN3P20807 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 AL139384.1-201ENST00000612143 3047 ntBASIC16.67■□□□□ 0.26
CAPN3P20807 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.67■□□□□ 0.26
CAPN3P20807 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.67■□□□□ 0.26
CAPN3P20807 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.67■□□□□ 0.26
CAPN3P20807 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CAPN3P20807 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CAPN3P20807 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.67■□□□□ 0.26
CAPN3P20807 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.67■□□□□ 0.26
CAPN3P20807 PRELID1P1-202ENST00000567272 903 ntBASIC16.67■□□□□ 0.26
CAPN3P20807 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.67■□□□□ 0.26
CAPN3P20807 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.67■□□□□ 0.26
CAPN3P20807 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CAPN3P20807 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CAPN3P20807 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.67■□□□□ 0.26
CAPN3P20807 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN3P20807 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
CAPN3P20807 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CAPN3P20807 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CAPN3P20807 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms