Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 AP001094.4-201ENST00000579008 2176 ntBASIC17.47■□□□□ 0.39
HLA-DPA1P20036 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 DUSP5P1-201ENST00000441325 1139 ntBASIC17.47■□□□□ 0.39
HLA-DPA1P20036 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.47■□□□□ 0.39
HLA-DPA1P20036 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 REXO1L6P-202ENST00000619970 1078 ntBASIC17.47■□□□□ 0.39
HLA-DPA1P20036 AC012313.10-201ENST00000623509 926 ntBASIC17.47■□□□□ 0.39
HLA-DPA1P20036 AL139288.1-201ENST00000623748 933 ntBASIC17.47■□□□□ 0.39
HLA-DPA1P20036 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPA1P20036 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 ACTG1P4-201ENST00000425123 1122 ntBASIC17.46■□□□□ 0.39
HLA-DPA1P20036 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 AL355877.3-201ENST00000622820 899 ntBASIC17.46■□□□□ 0.39
HLA-DPA1P20036 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.46■□□□□ 0.39
HLA-DPA1P20036 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DPA1P20036 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-DPA1P20036 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-DPA1P20036 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-DPA1P20036 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-DPA1P20036 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms