Protein–RNA interactions for Protein: P18085

ARF4, ADP-ribosylation factor 4, humanhuman

Predicted RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4P18085 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ARF4P18085 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.69■□□□□ 0.58
ARF4P18085 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
ARF4P18085 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
ARF4P18085 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.69■□□□□ 0.58
ARF4P18085 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
ARF4P18085 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.69■□□□□ 0.58
ARF4P18085 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.69■□□□□ 0.58
ARF4P18085 FAM185BP-201ENST00000443595 716 ntBASIC18.69■□□□□ 0.58
ARF4P18085 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.69■□□□□ 0.58
ARF4P18085 KRT19P2-202ENST00000557173 1012 ntBASIC18.69■□□□□ 0.58
ARF4P18085 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.69■□□□□ 0.58
ARF4P18085 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.69■□□□□ 0.58
ARF4P18085 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.69■□□□□ 0.58
ARF4P18085 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARF4P18085 AC093525.9-201ENST00000624961 1746 ntBASIC18.69■□□□□ 0.58
ARF4P18085 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ARF4P18085 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ARF4P18085 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ARF4P18085 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.68■□□□□ 0.58
ARF4P18085 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.68■□□□□ 0.58
ARF4P18085 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.68■□□□□ 0.58
ARF4P18085 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.68■□□□□ 0.58
ARF4P18085 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.68■□□□□ 0.58
ARF4P18085 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.68■□□□□ 0.58
ARF4P18085 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 MIR3687-2-201ENST00000577708 61 ntBASIC18.68■□□□□ 0.58
ARF4P18085 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ARF4P18085 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.68■□□□□ 0.58
ARF4P18085 ACTL9-202ENST00000612068 1252 ntBASIC18.68■□□□□ 0.58
ARF4P18085 MIR3687-1-201ENST00000614492 61 ntBASIC18.68■□□□□ 0.58
ARF4P18085 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.68■□□□□ 0.58
ARF4P18085 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ARF4P18085 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
ARF4P18085 EGFEM1P-202ENST00000431685 1563 ntBASIC18.68■□□□□ 0.58
ARF4P18085 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARF4P18085 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.67■□□□□ 0.58
ARF4P18085 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 AC025580.3-201ENST00000617932 1424 ntBASIC18.67■□□□□ 0.58
ARF4P18085 AC116353.5-201ENST00000638148 1699 ntBASIC18.67■□□□□ 0.58
ARF4P18085 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.67■□□□□ 0.58
ARF4P18085 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.67■□□□□ 0.58
ARF4P18085 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.67■□□□□ 0.58
ARF4P18085 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ARF4P18085 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.67■□□□□ 0.58
ARF4P18085 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
ARF4P18085 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.67■□□□□ 0.58
ARF4P18085 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.67■□□□□ 0.58
ARF4P18085 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.67■□□□□ 0.58
ARF4P18085 PDPK2P-202ENST00000562415 1191 ntBASIC18.67■□□□□ 0.58
ARF4P18085 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.67■□□□□ 0.58
ARF4P18085 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ARF4P18085 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ARF4P18085 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.67■□□□□ 0.58
ARF4P18085 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARF4P18085 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ARF4P18085 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.67■□□□□ 0.58
ARF4P18085 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARF4P18085 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ARF4P18085 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARF4P18085 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.66■□□□□ 0.58
ARF4P18085 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.66■□□□□ 0.58
ARF4P18085 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARF4P18085 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARF4P18085 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARF4P18085 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ARF4P18085 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms