Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMC3P17980 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PSMC3P17980 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMC3P17980 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PSMC3P17980 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.04■□□□□ 0.48
PSMC3P17980 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.04■□□□□ 0.48
PSMC3P17980 ABALON-201ENST00000629058 1903 ntBASIC18.04■□□□□ 0.48
PSMC3P17980 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PSMC3P17980 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
PSMC3P17980 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.04■□□□□ 0.48
PSMC3P17980 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.04■□□□□ 0.48
PSMC3P17980 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.04■□□□□ 0.48
PSMC3P17980 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PSMC3P17980 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.04■□□□□ 0.48
PSMC3P17980 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.04■□□□□ 0.48
PSMC3P17980 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PSMC3P17980 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.04■□□□□ 0.48
PSMC3P17980 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PSMC3P17980 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.04■□□□□ 0.48
PSMC3P17980 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PSMC3P17980 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.03■□□□□ 0.48
PSMC3P17980 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PSMC3P17980 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
PSMC3P17980 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PSMC3P17980 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
PSMC3P17980 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.03■□□□□ 0.48
PSMC3P17980 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.03■□□□□ 0.48
PSMC3P17980 CNN2P11-201ENST00000429351 262 ntBASIC18.03■□□□□ 0.48
PSMC3P17980 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.03■□□□□ 0.48
PSMC3P17980 DDX43P3-201ENST00000441064 443 ntBASIC18.03■□□□□ 0.48
PSMC3P17980 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.03■□□□□ 0.48
PSMC3P17980 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.03■□□□□ 0.48
PSMC3P17980 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PSMC3P17980 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PSMC3P17980 LINC02084-201ENST00000606069 1096 ntBASIC18.03■□□□□ 0.48
PSMC3P17980 GGTLC5P-201ENST00000617623 998 ntBASIC18.03■□□□□ 0.48
PSMC3P17980 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.03■□□□□ 0.48
PSMC3P17980 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PSMC3P17980 AC106820.2-201ENST00000563775 3264 ntBASIC18.03■□□□□ 0.48
PSMC3P17980 ELL2P1-201ENST00000413990 1906 ntBASIC18.03■□□□□ 0.48
PSMC3P17980 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.03■□□□□ 0.48
PSMC3P17980 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PSMC3P17980 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PSMC3P17980 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMC3P17980 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMC3P17980 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMC3P17980 AC097637.2-201ENST00000624096 1997 ntBASIC18.02■□□□□ 0.48
PSMC3P17980 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.02■□□□□ 0.48
PSMC3P17980 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMC3P17980 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.02■□□□□ 0.48
PSMC3P17980 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PSMC3P17980 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMC3P17980 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMC3P17980 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMC3P17980 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PSMC3P17980 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMC3P17980 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMC3P17980 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.02■□□□□ 0.48
PSMC3P17980 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PSMC3P17980 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.02■□□□□ 0.48
PSMC3P17980 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.02■□□□□ 0.48
PSMC3P17980 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMC3P17980 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PSMC3P17980 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.02■□□□□ 0.48
PSMC3P17980 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.02■□□□□ 0.48
PSMC3P17980 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.02■□□□□ 0.48
PSMC3P17980 AL078644.1-201ENST00000609881 752 ntBASIC18.02■□□□□ 0.48
PSMC3P17980 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
PSMC3P17980 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.02■□□□□ 0.48
PSMC3P17980 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PSMC3P17980 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PSMC3P17980 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PSMC3P17980 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PSMC3P17980 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms