Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TIMP2P16035 CROCCP2-202ENST00000412962 2773 ntBASIC17.2■□□□□ 0.34
TIMP2P16035 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TIMP2P16035 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
TIMP2P16035 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TIMP2P16035 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP2P16035 IGLL3P-201ENST00000412472 434 ntBASIC17.2■□□□□ 0.34
TIMP2P16035 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.2■□□□□ 0.34
TIMP2P16035 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.2■□□□□ 0.34
TIMP2P16035 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TIMP2P16035 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.2■□□□□ 0.34
TIMP2P16035 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP2P16035 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP2P16035 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP2P16035 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP2P16035 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.2■□□□□ 0.34
TIMP2P16035 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP2P16035 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP2P16035 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP2P16035 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.2■□□□□ 0.34
TIMP2P16035 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP2P16035 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.2■□□□□ 0.34
TIMP2P16035 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TIMP2P16035 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TIMP2P16035 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TIMP2P16035 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TIMP2P16035 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.19■□□□□ 0.34
TIMP2P16035 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.19■□□□□ 0.34
TIMP2P16035 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TIMP2P16035 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.19■□□□□ 0.34
TIMP2P16035 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TIMP2P16035 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.19■□□□□ 0.34
TIMP2P16035 EGFEM1P-202ENST00000431685 1563 ntBASIC17.19■□□□□ 0.34
TIMP2P16035 PP12613-201ENST00000424958 2230 ntBASIC17.19■□□□□ 0.34
TIMP2P16035 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP2P16035 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TIMP2P16035 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TIMP2P16035 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP2P16035 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP2P16035 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.18■□□□□ 0.34
TIMP2P16035 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP2P16035 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP2P16035 SLC25A6P2-201ENST00000497974 877 ntBASIC17.18■□□□□ 0.34
TIMP2P16035 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP2P16035 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.18■□□□□ 0.34
TIMP2P16035 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.18■□□□□ 0.34
TIMP2P16035 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP2P16035 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.18■□□□□ 0.34
TIMP2P16035 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TIMP2P16035 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP2P16035 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP2P16035 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP2P16035 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TIMP2P16035 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TIMP2P16035 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.17■□□□□ 0.34
TIMP2P16035 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP2P16035 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP2P16035 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms