Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.94■□□□□ 0.62
CLTAP09496 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.94■□□□□ 0.62
CLTAP09496 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.94■□□□□ 0.62
CLTAP09496 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.94■□□□□ 0.62
CLTAP09496 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CLTAP09496 AC139887.3-201ENST00000568585 713 ntBASIC18.94■□□□□ 0.62
CLTAP09496 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.94■□□□□ 0.62
CLTAP09496 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.94■□□□□ 0.62
CLTAP09496 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.94■□□□□ 0.62
CLTAP09496 MIR7706-201ENST00000613747 67 ntBASIC18.94■□□□□ 0.62
CLTAP09496 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.94■□□□□ 0.62
CLTAP09496 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.94■□□□□ 0.62
CLTAP09496 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.94■□□□□ 0.62
CLTAP09496 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
CLTAP09496 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.93■□□□□ 0.62
CLTAP09496 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.93■□□□□ 0.62
CLTAP09496 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLTAP09496 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 AC046185.3-201ENST00000623228 1824 ntBASIC18.93■□□□□ 0.62
CLTAP09496 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
CLTAP09496 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLTAP09496 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLTAP09496 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.93■□□□□ 0.62
CLTAP09496 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.93■□□□□ 0.62
CLTAP09496 AL049840.3-201ENST00000602669 611 ntBASIC18.93■□□□□ 0.62
CLTAP09496 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.93■□□□□ 0.62
CLTAP09496 AC008735.5-201ENST00000623544 497 ntBASIC18.93■□□□□ 0.62
CLTAP09496 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.93■□□□□ 0.62
CLTAP09496 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLTAP09496 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.93■□□□□ 0.62
CLTAP09496 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.93■□□□□ 0.62
CLTAP09496 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.93■□□□□ 0.62
CLTAP09496 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLTAP09496 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.92■□□□□ 0.62
CLTAP09496 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLTAP09496 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.92■□□□□ 0.62
CLTAP09496 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLTAP09496 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.92■□□□□ 0.62
CLTAP09496 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.92■□□□□ 0.62
CLTAP09496 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLTAP09496 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.92■□□□□ 0.62
CLTAP09496 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.92■□□□□ 0.62
CLTAP09496 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.92■□□□□ 0.62
CLTAP09496 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.92■□□□□ 0.62
CLTAP09496 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.92■□□□□ 0.62
CLTAP09496 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.92■□□□□ 0.62
CLTAP09496 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CLTAP09496 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLTAP09496 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.92■□□□□ 0.62
CLTAP09496 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.92■□□□□ 0.62
CLTAP09496 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CLTAP09496 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLTAP09496 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLTAP09496 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.92■□□□□ 0.62
CLTAP09496 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLTAP09496 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLTAP09496 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLTAP09496 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 AC124067.4-201ENST00000519691 2379 ntBASIC18.91■□□□□ 0.62
CLTAP09496 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLTAP09496 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms