Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC254562.1-201ENST00000417586 456 ntBASIC20.32■□□□□ 0.84
HLA-DOAP06340 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 FAM58CP-201ENST00000435741 640 ntBASIC20.32■□□□□ 0.84
HLA-DOAP06340 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOAP06340 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOAP06340 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 ACTL9-202ENST00000612068 1252 ntBASIC20.32■□□□□ 0.84
HLA-DOAP06340 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOAP06340 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOAP06340 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOAP06340 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOAP06340 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOAP06340 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOAP06340 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOAP06340 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-DOAP06340 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 PMS2P2-201ENST00000425039 1128 ntBASIC20.31■□□□□ 0.84
HLA-DOAP06340 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 AC068137.2-201ENST00000605408 478 ntBASIC20.31■□□□□ 0.84
HLA-DOAP06340 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DOAP06340 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOAP06340 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DOAP06340 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DOAP06340 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DOAP06340 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DOAP06340 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HLA-DOAP06340 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DOAP06340 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DOAP06340 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DOAP06340 ACTG1P14-201ENST00000446382 1122 ntBASIC20.3■□□□□ 0.84
HLA-DOAP06340 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.3■□□□□ 0.84
HLA-DOAP06340 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
HLA-DOAP06340 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
HLA-DOAP06340 AC091812.2-201ENST00000619081 385 ntBASIC20.3■□□□□ 0.84
HLA-DOAP06340 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DOAP06340 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DOAP06340 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DOAP06340 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DOAP06340 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.29■□□□□ 0.84
HLA-DOAP06340 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DOAP06340 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOAP06340 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms