Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
APOC3P02656 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
APOC3P02656 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
APOC3P02656 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 AC106881.1-201ENST00000605849 3329 ntBASIC13.9□□□□□ -0.18
APOC3P02656 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.9□□□□□ -0.19
APOC3P02656 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
APOC3P02656 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
APOC3P02656 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
APOC3P02656 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.9□□□□□ -0.19
APOC3P02656 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.19
APOC3P02656 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOC3P02656 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOC3P02656 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC3P02656 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOC3P02656 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC3P02656 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC3P02656 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.89□□□□□ -0.19
APOC3P02656 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
APOC3P02656 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC3P02656 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
APOC3P02656 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC3P02656 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 AC023157.3-201ENST00000619086 2088 ntBASIC13.89□□□□□ -0.19
APOC3P02656 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC3P02656 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC3P02656 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 MTHFR-217ENST00000641820 1569 ntBASIC13.88□□□□□ -0.19
APOC3P02656 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC3P02656 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.88□□□□□ -0.19
APOC3P02656 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
APOC3P02656 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC3P02656 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
APOC3P02656 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.88□□□□□ -0.19
APOC3P02656 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 MIR572-201ENST00000384983 95 ntBASIC13.88□□□□□ -0.19
APOC3P02656 KRT18P68-201ENST00000392293 1000 ntBASIC13.88□□□□□ -0.19
APOC3P02656 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC3P02656 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.88□□□□□ -0.19
APOC3P02656 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
APOC3P02656 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC3P02656 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
APOC3P02656 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.88□□□□□ -0.19
APOC3P02656 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC3P02656 KRT8P9-201ENST00000558927 1449 ntBASIC13.88□□□□□ -0.19
APOC3P02656 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
APOC3P02656 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
APOC3P02656 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms