Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.51■□□□□ 0.55
TIMP1P01033 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.51■□□□□ 0.55
TIMP1P01033 U1.21-201ENST00000580816 167 ntBASIC18.51■□□□□ 0.55
TIMP1P01033 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.51■□□□□ 0.55
TIMP1P01033 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.51■□□□□ 0.55
TIMP1P01033 AC018529.1-201ENST00000613063 361 ntBASIC18.51■□□□□ 0.55
TIMP1P01033 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMP1P01033 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMP1P01033 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMP1P01033 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMP1P01033 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.51■□□□□ 0.55
TIMP1P01033 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMP1P01033 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.51■□□□□ 0.55
TIMP1P01033 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.51■□□□□ 0.55
TIMP1P01033 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TIMP1P01033 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.5■□□□□ 0.55
TIMP1P01033 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.5■□□□□ 0.55
TIMP1P01033 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.5■□□□□ 0.55
TIMP1P01033 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TIMP1P01033 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TIMP1P01033 U91328.1-201ENST00000437528 223 ntBASIC18.5■□□□□ 0.55
TIMP1P01033 AC022494.1-201ENST00000466044 728 ntBASIC18.5■□□□□ 0.55
TIMP1P01033 MIR3909-201ENST00000579518 119 ntBASIC18.5■□□□□ 0.55
TIMP1P01033 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 AL031055.1-201ENST00000606362 631 ntBASIC18.5■□□□□ 0.55
TIMP1P01033 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
TIMP1P01033 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.5■□□□□ 0.55
TIMP1P01033 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TIMP1P01033 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.5■□□□□ 0.55
TIMP1P01033 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP1P01033 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMP1P01033 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TIMP1P01033 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.49■□□□□ 0.55
TIMP1P01033 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.49■□□□□ 0.55
TIMP1P01033 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.49■□□□□ 0.55
TIMP1P01033 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TIMP1P01033 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMP1P01033 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.49■□□□□ 0.55
TIMP1P01033 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.49■□□□□ 0.55
TIMP1P01033 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.49■□□□□ 0.55
TIMP1P01033 AL138828.2-201ENST00000615812 383 ntBASIC18.49■□□□□ 0.55
TIMP1P01033 SPDYE12P-201ENST00000618416 771 ntBASIC18.49■□□□□ 0.55
TIMP1P01033 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMP1P01033 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMP1P01033 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 WIZP1-201ENST00000531444 2299 ntBASIC18.49■□□□□ 0.55
TIMP1P01033 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP1P01033 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
TIMP1P01033 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.49■□□□□ 0.55
TIMP1P01033 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMP1P01033 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP1P01033 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMP1P01033 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP1P01033 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP1P01033 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.48■□□□□ 0.55
TIMP1P01033 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP1P01033 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms