Protein–RNA interactions for Protein: P00533

EGFR, Epidermal growth factor receptor, humanhuman

Predictions only

Length 1,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EGFRP00533 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EGFRP00533 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EGFRP00533 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
EGFRP00533 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EGFRP00533 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EGFRP00533 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EGFRP00533 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EGFRP00533 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
EGFRP00533 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EGFRP00533 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EGFRP00533 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EGFRP00533 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EGFRP00533 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EGFRP00533 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
EGFRP00533 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
EGFRP00533 TSSK5P-201ENST00000423978 907 ntBASIC20.33■□□□□ 0.85
EGFRP00533 NME2P1-201ENST00000426182 414 ntBASIC20.33■□□□□ 0.85
EGFRP00533 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.33■□□□□ 0.85
EGFRP00533 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EGFRP00533 AC109635.5-201ENST00000533593 962 ntBASIC20.33■□□□□ 0.85
EGFRP00533 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.33■□□□□ 0.85
EGFRP00533 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.33■□□□□ 0.85
EGFRP00533 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
EGFRP00533 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.33■□□□□ 0.85
EGFRP00533 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
EGFRP00533 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EGFRP00533 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
EGFRP00533 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EGFRP00533 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.84
EGFRP00533 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EGFRP00533 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EGFRP00533 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
EGFRP00533 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EGFRP00533 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
EGFRP00533 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.33■□□□□ 0.84
EGFRP00533 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EGFRP00533 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EGFRP00533 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.32■□□□□ 0.84
EGFRP00533 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.32■□□□□ 0.84
EGFRP00533 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EGFRP00533 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.32■□□□□ 0.84
EGFRP00533 MIR346-201ENST00000362234 95 ntBASIC20.32■□□□□ 0.84
EGFRP00533 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
EGFRP00533 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EGFRP00533 COX5BP8-201ENST00000416911 349 ntBASIC20.32■□□□□ 0.84
EGFRP00533 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.32■□□□□ 0.84
EGFRP00533 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.32■□□□□ 0.84
EGFRP00533 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.32■□□□□ 0.84
EGFRP00533 NOP2-220ENST00000545915 630 ntTSL 2 BASIC20.32■□□□□ 0.84
EGFRP00533 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EGFRP00533 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
EGFRP00533 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.32■□□□□ 0.84
EGFRP00533 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.32■□□□□ 0.84
EGFRP00533 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EGFRP00533 AIRN-201ENST00000601203 4374 ntBASIC20.32■□□□□ 0.84
EGFRP00533 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
EGFRP00533 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
EGFRP00533 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EGFRP00533 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EGFRP00533 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
EGFRP00533 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
EGFRP00533 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
EGFRP00533 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EGFRP00533 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.31■□□□□ 0.84
EGFRP00533 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EGFRP00533 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
EGFRP00533 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EGFRP00533 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
EGFRP00533 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EGFRP00533 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.31■□□□□ 0.84
EGFRP00533 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.31■□□□□ 0.84
EGFRP00533 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.31■□□□□ 0.84
EGFRP00533 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.31■□□□□ 0.84
EGFRP00533 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.31■□□□□ 0.84
EGFRP00533 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.31■□□□□ 0.84
EGFRP00533 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.31■□□□□ 0.84
EGFRP00533 AC005412.3-201ENST00000580309 715 ntBASIC20.31■□□□□ 0.84
EGFRP00533 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EGFRP00533 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
EGFRP00533 AC093503.3-201ENST00000624917 2352 ntBASIC20.31■□□□□ 0.84
EGFRP00533 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EGFRP00533 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
EGFRP00533 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EGFRP00533 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EGFRP00533 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EGFRP00533 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EGFRP00533 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
EGFRP00533 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.3■□□□□ 0.84
EGFRP00533 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
EGFRP00533 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
EGFRP00533 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EGFRP00533 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EGFRP00533 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EGFRP00533 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.3■□□□□ 0.84
EGFRP00533 WASH6P-202ENST00000359512 1437 ntBASIC20.3■□□□□ 0.84
EGFRP00533 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.3■□□□□ 0.84
EGFRP00533 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EGFRP00533 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EGFRP00533 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EGFRP00533 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms